y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_022073m |
Family | GH3 |
Protein Properties | Length: 766 Molecular Weight: 83334.6 Isoelectric Point: 6.4609 |
Chromosome | Chromosome/Scaffold: 03221 Start: 15577 End: 18336 |
Description | beta-D-xylosidase 4 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 77 | 327 | 0 |
ASVSRLGIPNYNWWSEALHGVSYVGHGTNFSNVVPAATSFPQVILSAASFNVSLFQAIGKVVSTEARAMHNVGLTGLTFWSPNVNIFRDPRWGRGQETPG EDPLLSSKYASSYVRGLQQRDDGDQNRLKVAACCKHYTAYDLDHWNGTDRTNFNAVVTRQDMEDTFQPPFRSCVLDGNVASIMCSYNQVNGKPTCADPNL LSGVIRGEWKLNGYIVSDCDSVYEFFNRQHYTKTTEEAAATAILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 766 Download |
EPKLSVFFCF SFYLLTSKAR ALAQYSSPVF ACDVVTNPSL ASFGFCNTSL GFSDRVVDLV 60 KRLTLQEKIG FLVDKSASVS RLGIPNYNWW SEALHGVSYV GHGTNFSNVV PAATSFPQVI 120 LSAASFNVSL FQAIGKVVST EARAMHNVGL TGLTFWSPNV NIFRDPRWGR GQETPGEDPL 180 LSSKYASSYV RGLQQRDDGD QNRLKVAACC KHYTAYDLDH WNGTDRTNFN AVVTRQDMED 240 TFQPPFRSCV LDGNVASIMC SYNQVNGKPT CADPNLLSGV IRGEWKLNGY IVSDCDSVYE 300 FFNRQHYTKT TEEAAATAIL AGLDLNCGSF LGQHTEAAVK AGLVDMSNID KAVSNNFATM 360 MRLGFFDGDP TKQIYGNLGP KDVCTAENQD LAREAARQGI VLLKNNPGSL PLSPTSIKML 420 AVIGPNANAT LTMIGNYQGI PCNYTTPLQG LTALVATAYH AGCYNVACDK AQVDDAKKVA 480 ASADAVVLVM GANGSIETEG FDRVDLLLPG QQSLLVTEVA SVSKAPVILV IMSGGGMDVS 540 FAKNNDKITS ILWVGYPGEA GGAAIADVIF GYHNPSGRLP MTWYPQSYVD KVPMTNMNMR 600 ADPSTGYPGR TYRFYTGETV YSFGDGLSYS TFEHKLVQAP EVVSVPLEED HPCRFSKCIS 660 IDAVEKSCED LAFDVHLKVE NTGIMRGSHV VLLFYMPPSV HNSPRKHLVD FEKVLLDAKT 720 ATMVQFKVDV CKHLSINDEF GSRKVALGEH VLHIGSLNHS FTVRI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 9.0e-51 | 80 | 463 | 394 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-51 | 400 | 631 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 5.0e-61 | 64 | 355 | 321 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-69 | 31 | 730 | 784 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 6 | 765 | 779 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 2 | 765 | 9 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 2 | 765 | 201 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 26 | 765 | 29 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 27 | 765 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 13 | 765 | 25 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 114 | 728 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u48_A | 0 | 114 | 728 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u4a_B | 0 | 114 | 728 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3u4a_A | 0 | 114 | 728 | 91 | 696 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2x41_A | 5e-36 | 54 | 764 | 2 | 708 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |