y
Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10027856m |
Family | GH3 |
Protein Properties | Length: 783 Molecular Weight: 84604.1 Isoelectric Point: 7.0121 |
Chromosome | Chromosome/Scaffold: 8 Start: 6659340 End: 6662205 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 73 | 325 | 0 |
GIPRLGVPSYEWWGEALHGVSNVGPAVRFNATVPGATSFPAVILSAASFNASLWLKMGQVVSTEARAMYNVGQAGLTYWSPNVNVFRDPRWGRGQETPGE DPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQPPFKSCVQEGHVSSVMCSYNRVNGIPTCADP NLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRYTATPEDAVALALNAGLNMNC |
Full Sequence |
---|
Protein Sequence Length: 783 Download |
MKPQYHLSLC LAILLLLTTQ CTPQQFACDK SKSETSQFPF CNSSLTYEDR AKNLVSLLTL 60 KEKVQQLVNT ATGIPRLGVP SYEWWGEALH GVSNVGPAVR FNATVPGATS FPAVILSAAS 120 FNASLWLKMG QVVSTEARAM YNVGQAGLTY WSPNVNVFRD PRWGRGQETP GEDPLVVSKY 180 AVNYVRGLQE IGDSKNSSSD RLKVSSCCKH YTAYDVDNWK GVDRFHFDAK VTKQDLEDTY 240 QPPFKSCVQE GHVSSVMCSY NRVNGIPTCA DPNLLKGVVR DQWGLDGYIV SDCDSIQVYD 300 TAIRYTATPE DAVALALNAG LNMNCGDYLG KYTENAVNMS KVKESVVDQA LIYNYIVLMR 360 LGFFDGDPKS QPLGNLGPSD VCTDDHKSLA LDAARQGIVL LGNNGALPLS SNATQNLAVI 420 GPNANATNVM ISNYAGIPCG YTSPLQGLQE YVSAVTYAPG CSNVKCQDDS LIEPAAKAAA 480 AADVVVVVVG LDQSIEAEGL DRENLTLPGY QEKLVMEVAN ATKGTVILVV MAAGPVDISF 540 AKSNRKIGGI LWVGYPGQAG GDAIAQIIFG DYNPAGRSPF TWYPQQYVDQ LPMTDMNMRA 600 NATANLPGRT YRFYSGKTVY PFGHGLSYSS FSKFIVSAPS TVLIKKNRNS IHSSHAQAID 660 VTTVNCKDLH FHVVIGVKNN GPMSGSHVVL IFWKPPSAST AGAPNVELVG FERVDVQKGK 720 TKNVTVGFDV CQGLNLVDTD GQRKLVIGLH TLIVGSPSER QVRHHLNVRL ARSASETDLA 780 IM* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-49 | 398 | 629 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-54 | 51 | 450 | 407 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-63 | 45 | 350 | 314 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 7.0e-72 | 109 | 749 | 691 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 36 | 755 | 735 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02547.1 | 0 | 1 | 776 | 1 | 779 | beta-1,4-xylosidase [Arabidopsis thaliana] |
EMBL | CAN82161.1 | 0 | 7 | 776 | 9 | 792 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_188596.1 | 0 | 1 | 771 | 1 | 774 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264114.1 | 0 | 7 | 773 | 33 | 813 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527511.1 | 0 | 24 | 775 | 23 | 789 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 109 | 767 | 91 | 734 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3u48_A | 0 | 109 | 767 | 91 | 734 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3u4a_B | 0 | 109 | 767 | 91 | 734 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3u4a_A | 0 | 109 | 767 | 91 | 734 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 2x41_A | 1e-36 | 49 | 632 | 2 | 604 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |