y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.345770.1 |
Family | GH3 |
Protein Properties | Length: 783 Molecular Weight: 84476.2 Isoelectric Point: 7.3447 |
Chromosome | Chromosome/Scaffold: 03443 Start: 57641 End: 62225 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 95 | 344 | 0 |
NVTRLGIPKYEWWSEALHGVSYVGPGTKFSNVVPGATSFPQVILTAASFNASLFEAIGKVVSTEARAMYNVGLAGLTYWSPNVNIFRDPRWGRGQETPGE DPLLSSKYAAGYVRGLQQRDDGDPDRLKVAACCKHYTAYDLDNWKGTDRYHFNAVVSPQDLEDTFQPPFKSCVIDGNVASVMCSYNQVNGKPTCADPDLL AGVIRGQWKLNGYIVSDCDSVDVLYNSQHYTKSPEEAAAKTILAGLDLDC |
Full Sequence |
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Protein Sequence Length: 783 Download |
MAAIQLAMAS SPSLRNLLSL FTFSFFFFFL LSLSFCPTTS AQSPTAFACD AETNPSVSGF 60 AFCDSSLGFE ARVEDLVKRL TLQEKIGFLI NNARNVTRLG IPKYEWWSEA LHGVSYVGPG 120 TKFSNVVPGA TSFPQVILTA ASFNASLFEA IGKVVSTEAR AMYNVGLAGL TYWSPNVNIF 180 RDPRWGRGQE TPGEDPLLSS KYAAGYVRGL QQRDDGDPDR LKVAACCKHY TAYDLDNWKG 240 TDRYHFNAVV SPQDLEDTFQ PPFKSCVIDG NVASVMCSYN QVNGKPTCAD PDLLAGVIRG 300 QWKLNGYIVS DCDSVDVLYN SQHYTKSPEE AAAKTILAGL DLDCGDFLGK HTEAAVTGGL 360 VNEAAISKAV FNNLLTLMRL GFFDGNPSKQ LYGKLGPKDV CTPEHQELAR EAARQGIVLL 420 KNSPKSLPLS SSAIKSLAVI GPNANVTKTM IGNYEGTPCK YTTPLQGLSA VVSTSFQPGC 480 ANVACTSAQL DEAKKIAASA DATVLVVGSD QSIEAESRDR VDLNLPGQQA LLITEVAKAS 540 KGPVILVIMT GGGMDITFAK KDDKITSILW VGFPGEAGGA AIADVIFGSF NPSGRLPMTW 600 YPQSYVEKVP MTDMRMRPSA SNGFPGRTYR FYTGETIYSF GDGLSYSDFK HHLVKAPKLV 660 SIPLEEGHIC HSSKCHSLEV VQESCQNLGF DVHLRVKNVG QRSGSHTVFL YSTPPSVHNS 720 PQKHLLGFEK VSLGRGGETV VRFKVDVCKD LSVADEVGSR KVALGLHILH VGTLKHSLNV 780 KV* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-50 | 97 | 480 | 390 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-54 | 439 | 647 | 216 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 4.0e-64 | 81 | 370 | 320 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-78 | 43 | 766 | 803 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 36 | 782 | 768 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 42 | 782 | 34 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 3 | 782 | 190 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 42 | 782 | 28 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 47 | 782 | 4 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 41 | 782 | 35 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 131 | 745 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u48_A | 0 | 131 | 745 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u4a_B | 0 | 131 | 745 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u4a_A | 0 | 131 | 745 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 4i3g_B | 5e-38 | 69 | 470 | 50 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |