y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01006776001 |
Family | GH3 |
Protein Properties | Length: 769 Molecular Weight: 84643.2 Isoelectric Point: 5.5289 |
Chromosome | Chromosome/Scaffold: Start: 28328860 End: 28332255 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 74 | 321 | 0 |
AAIPRLYIPAYEWWSESLHGIATNGPGVSFNGTVSAATSFPQVLLTAASFNRSLWFSIGSAIAVEARAMYNVGQAGLTFWAPNINIFRDPRWGRGQETPG EDPMVASAYAVEFVRGFQGDSDGDGLMLSACCKHLTAYDLEKWGNFSRYSFDAVVSNQDLEDTYQPPFRSCVQQGKASCLMCSYNRVNGVPACARQDLFQ KAKTEWGFKGYITSDCDAVATVYEYQHYANSPEDAVADVLKAGTDINC |
Full Sequence |
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Protein Sequence Length: 769 Download |
MSTEWRFLFI CLFLQVLPLF SISESTHPQF PCMPPTNSDY PFCNTSLPIS TRAQSLVSLL 60 TLSEKIQQLS DEAAAIPRLY IPAYEWWSES LHGIATNGPG VSFNGTVSAA TSFPQVLLTA 120 ASFNRSLWFS IGSAIAVEAR AMYNVGQAGL TFWAPNINIF RDPRWGRGQE TPGEDPMVAS 180 AYAVEFVRGF QGDSDGDGLM LSACCKHLTA YDLEKWGNFS RYSFDAVVSN QDLEDTYQPP 240 FRSCVQQGKA SCLMCSYNRV NGVPACARQD LFQKAKTEWG FKGYITSDCD AVATVYEYQH 300 YANSPEDAVA DVLKAGTDIN CGSYMLRHTQ SAIDQGKVKE EDIDRALFNL FSVQMRLGLF 360 DGDPANGLYG NLGPKDVCTK EHRTLALEAA RQGIVLLKND KKFLPLDKSR ISSLAIIGPQ 420 ADQPFLGGGY TGIPCKPESL VEGLKTYVEK TSFAAGCVDV PCLSDTGFDE AVSIARKADI 480 VVVVAGLDLS QETEDHDRVS LLLPGKQMAL ISSVASAIQK PLVLVLTGGG PLDVSFAEQD 540 PRIASILWIG YPGEAGAKAL AEIIFGDFNP GGRLPMTWYP ESFTRVPMND MNMRADPYRG 600 YPGRTYRFYI GHRVYGFGQG LSYTKFAYQF VSAPNKLNLL RSSDTVSSKN LPRQRREEVN 660 YFHIEELDTC DSLRFHVEIS VTNVGDMDGS HVVMLFSRVP KIVKGTPEKQ LIGFSRVHTV 720 SRRSTETSIM VDPCEHFSIA NEQGKRIMPL GDHTIMLGDV VHSVSVEI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-49 | 394 | 624 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-54 | 72 | 431 | 366 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-62 | 61 | 346 | 316 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-73 | 66 | 758 | 742 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 768 | 780 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC41913.1 | 0 | 62 | 767 | 2 | 731 | putative beta-xylosidase [Arabidopsis thaliana] |
EMBL | CBI25718.1 | 0 | 1 | 768 | 1 | 768 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 26 | 768 | 26 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 1 | 768 | 1 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 27 | 768 | 27 | 779 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 111 | 758 | 91 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u48_A | 0 | 111 | 758 | 91 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_B | 0 | 111 | 758 | 91 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_A | 0 | 111 | 758 | 91 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 2x41_A | 1.00053e-42 | 52 | 758 | 3 | 699 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |