y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G198200.1 |
Family | GH3 |
Protein Properties | Length: 773 Molecular Weight: 83374.3 Isoelectric Point: 8.6338 |
Chromosome | Chromosome/Scaffold: 11 Start: 47882079 End: 47887109 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 77 | 324 | 0 |
AAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATSFPQVITSAASFNESLWEQIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPG EDPVLAGKYAANYVRGLQSPTGIRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLADTYDVPFKSCVVEGKVASVMCSYNQVNGKPTCADPDLLKG TIRGQWGLSGYIVSDCDSVGVMYDTQHFTSTPEESAAAAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 773 Download |
MAKPILFPLL FITTAVFLGF FISSAESRPP FACDPRNGLT RSLKFCRANL PIHVRARDLI 60 GRLTLAEKIR LLVNNAAAVP RLGIQGYEWW SEALHGVSNV GPGTKFGGAF PGATSFPQVI 120 TSAASFNESL WEQIGRVVSD EARAMYNGGM AGLTYWSPNV NIFRDPRWGR GQETPGEDPV 180 LAGKYAANYV RGLQSPTGIR LKVAACCKHY TAYDLDNWNG VDRYHFNARV SKQDLADTYD 240 VPFKSCVVEG KVASVMCSYN QVNGKPTCAD PDLLKGTIRG QWGLSGYIVS DCDSVGVMYD 300 TQHFTSTPEE SAAAAIKAGL DLDCGPFLAI HTDLAVRRGL LAEADVDLAL ANTITIQMRL 360 GMFDGEPSAQ PYGNLGPRDV CTPAHQQLAL EAARQGIVLL KNSGSLPLST ARHRTVAVIG 420 PNSDVTVTMI GNYAGVACGY TSPLQGISRY ARTIHQAGCS DVACDTNNLF GAAEIAAHEA 480 DATVLVMGLD QSIEAEFRDR VGLLLPGRQQ ELVSRVARAS RGPTVLVLMS GGPIDVSFAK 540 NDPRVSAIIW AGYPGQAGGT AIADVLFGTT NPGGKLPMTW YPQDYVAKVP MTNMGIRPSR 600 GYPGRTYRFY KGPVVFPFGH GLSYTSFKHS LALAPTDLSV LLDTNLFATK NYSTLSSNAI 660 RVKHAKCDLL SSLFHIDVEN TGNMDGTHTL LVFSTPPAGQ KWSPNKQLIG FHRVHVIAGS 720 KQRVKINIHA CKHLSVVDEF GIRRIPMGSH SLHIGDLKHS ISLQANLEGI KV* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-53 | 74 | 447 | 380 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-58 | 397 | 625 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 1.0e-60 | 52 | 326 | 279 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-68 | 114 | 728 | 680 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 8 | 765 | 777 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS17751.2 | 0 | 6 | 771 | 11 | 771 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAG28345.1 | 0 | 26 | 758 | 23 | 762 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002311398.1 | 0 | 24 | 767 | 13 | 755 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316021.1 | 0 | 26 | 771 | 23 | 767 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 26 | 771 | 37 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 114 | 728 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u48_A | 0 | 114 | 728 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_B | 0 | 114 | 728 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_A | 0 | 114 | 728 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2x41_A | 0 | 55 | 767 | 3 | 711 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |