y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_002121m |
Family | GH3 |
Protein Properties | Length: 771 Molecular Weight: 84741.4 Isoelectric Point: 7.4529 |
Chromosome | Chromosome/Scaffold: 07027 Start: 75979 End: 80357 |
Description | Glycosyl hydrolase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 73 | 325 | 0 |
IPRLGIPAYEWWSEALHGVANVGRGIHFEGTIRSATSFPQVILTAASFDAYQWYRIGQVIGREARAVYNAGQATGMTFWAPNINIFRDPRWGRGQETPGE DPLVTGKYAVSYVRGVQGDSFQGGKLKGHLQASACCKHFTAYDLDNWKGVNRFVFDARVTIQDLADTYQPPFQSCVQQGKASGIMCAYNRVNGVPSCADF NLLSKTARGQWDFHGYITSDCDAVSIIYNDQGYAKSPEDAVVDVLKAGMDLNC |
Full Sequence |
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Protein Sequence Length: 771 Download |
MRSQTLSYFI FTLLVFRVAS TQPPFSCDPS NPSTSSYLFC KTTIPISQRV RDLVCRLTLD 60 EKISQLVSSA PPIPRLGIPA YEWWSEALHG VANVGRGIHF EGTIRSATSF PQVILTAASF 120 DAYQWYRIGQ VIGREARAVY NAGQATGMTF WAPNINIFRD PRWGRGQETP GEDPLVTGKY 180 AVSYVRGVQG DSFQGGKLKG HLQASACCKH FTAYDLDNWK GVNRFVFDAR VTIQDLADTY 240 QPPFQSCVQQ GKASGIMCAY NRVNGVPSCA DFNLLSKTAR GQWDFHGYIT SDCDAVSIIY 300 NDQGYAKSPE DAVVDVLKAG MDLNCGSFLQ KHTKAAVEQK KLPESAIDRA LHNLFSIRMR 360 LGLFNGNPTE QPFSNIGPDQ VCSQEHQMLA LEAARNGIVL LKNSAKLLPL SKSTTTSLAV 420 IGPNANSAQT LLGNYAGPPC KSVTPLQALQ NYIKNTIYHP GCDTVQCSSA SIDKAVDIAK 480 GVDHVVLIMG LDQTQEREEL DRVDLVLPGK QQELIINVAR CAKNPIVLVL LCGGPVDVSF 540 AKYDKNIGSI LWAGYPGEAG GIALADIIFG DHNPGGRLPV TWYPQEFVKV PMTDMRMRPD 600 SSSGYPGRTY RFYKGQSVFE FGYGLSYSKY SYELKSVTQN KLYLNQSSTM HVIDNSDSLR 660 STLVSELGAE FCKESEFSVR VGVENQGEMA GKHPILLFVR QATHGNGRPR KQLIGFKSVI 720 LSAGEKAEIE FELSPCEHFS RTNEDGLKVI EEGTHFLVVG DDKYPISIIV * 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 9.0e-50 | 398 | 586 | 196 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 6.0e-50 | 73 | 463 | 396 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-67 | 58 | 350 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 7.0e-72 | 30 | 735 | 798 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 9 | 768 | 778 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 12 | 770 | 15 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 1 | 769 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 13 | 770 | 16 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 770 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 770 | 1 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 108 | 760 | 91 | 722 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
PDB | 3u48_A | 0 | 108 | 760 | 91 | 722 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
PDB | 3u4a_B | 0 | 108 | 760 | 91 | 722 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
PDB | 3u4a_A | 0 | 108 | 760 | 91 | 722 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
PDB | 2x41_A | 0 | 48 | 760 | 2 | 699 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |