y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_032291m |
Family | GH3 |
Protein Properties | Length: 797 Molecular Weight: 87265.9 Isoelectric Point: 5.4255 |
Chromosome | Chromosome/Scaffold: 00396 Start: 68239 End: 71746 |
Description | Glycosyl hydrolase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 71 | 325 | 0 |
AGVSRLGIPAYEWWSEALHGVSDVGFGVRFNATVPGATSFPAVILSAASFNETLWLKMGQVVSTEARAMHNVGLAGLTFWSPNVNVFRDPRWGRGQETPG EDPLVVSKYAVNYVRGLQEVGEEENCTRGDKLKVSSCCKHYTAYDLDKWKDVDRFHFDAKVTKQDLEDTYQPPFRSCVEDAHVSSVMCSYNKVNGIPTCA DPDLLKGIIRDQWNLDGYIVSDCDSIEVYHDRMNYTATPEDAVALALKAGLNMNC |
Full Sequence |
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Protein Sequence Length: 797 Download |
MKIQLLLTLL LSLLLILPTT PQNNFACDQR SPETSQYPFC NTTLSYEDRA KDLVSRLTLQ 60 EKVQQLVNHA AGVSRLGIPA YEWWSEALHG VSDVGFGVRF NATVPGATSF PAVILSAASF 120 NETLWLKMGQ VVSTEARAMH NVGLAGLTFW SPNVNVFRDP RWGRGQETPG EDPLVVSKYA 180 VNYVRGLQEV GEEENCTRGD KLKVSSCCKH YTAYDLDKWK DVDRFHFDAK VTKQDLEDTY 240 QPPFRSCVED AHVSSVMCSY NKVNGIPTCA DPDLLKGIIR DQWNLDGYIV SDCDSIEVYH 300 DRMNYTATPE DAVALALKAG LNMNCGEFLR KYTENAVKLN KVEESVVDQA LLYDFIVLMR 360 LGFFDGDPKS LLFGNLGPSD VCSNEHQLLA LDAARQGIVL LDNNGALPLS KNTTKSLAVI 420 GPNANVTATM ISNYAGIPCQ YTTPLQGLQN YVPTATFEAG CSVSCTDDTQ FEAAAKVGST 480 ADAVVVVVGL DQSIEREELD RENLILPGYQ EKLVLDVANA ANGTVILVVM SGSPVDVSFA 540 KNNSKIGGIL WVGYPGQAGG DAIAQVIFGD YNPAGRSPFT WYPQAYVDQV PMTNMNMRAN 600 ASGDYPGRTY RFYTGETIYK FGHGLSYSTF SKFIVSAPST LPIKPNSHLK ANTILSVDDS 660 IEKYPFANNQ AIDASSLNCT SLQLVLVIGV RNNGPRNGDH VVLVFWKPPN TAEVSVAPSL 720 ELVGFSRVEV NRGKTKNTTV VIDVCKRLAL VDSEGKRKLV TGQHTFIIGS SSDRQVRHHV 780 DIRLAQYELG ESRVSM* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-57 | 398 | 629 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-58 | 40 | 450 | 427 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-68 | 58 | 350 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-73 | 31 | 774 | 836 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 18 | 769 | 760 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02547.1 | 0 | 7 | 785 | 9 | 774 | beta-1,4-xylosidase [Arabidopsis thaliana] |
EMBL | CAN82161.1 | 0 | 5 | 786 | 7 | 788 | hypothetical protein [Vitis vinifera] |
EMBL | CBI22460.1 | 0 | 5 | 788 | 31 | 766 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264114.1 | 0 | 5 | 788 | 31 | 814 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527511.1 | 0 | 15 | 786 | 16 | 786 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 1.96182e-44 | 62 | 772 | 61 | 725 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u48_A | 1.96182e-44 | 62 | 772 | 61 | 725 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u4a_B | 9.94922e-44 | 62 | 772 | 61 | 725 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u4a_A | 9.94922e-44 | 62 | 772 | 61 | 725 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 2x41_A | 6e-36 | 48 | 631 | 2 | 604 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |