y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.096780.1 |
Family | GH3 |
Protein Properties | Length: 770 Molecular Weight: 83500.7 Isoelectric Point: 8.8842 |
Chromosome | Chromosome/Scaffold: 00919 Start: 2268869 End: 2271881 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 74 | 320 | 0 |
GVPRLGIKAYQWWSEALHGVSNVGPGTRFGGEFPAATSFPQVISTAASFNASLWEAIGRVVSDEARAMYNGGVGGLTYWSPNVNIFRDPRWGRGQETPGE DPILAGTYAVNYVRGLQGTEGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFEVPFRMCVKGGKVSSVMCSYNQVNGVPTCADPNLLTNT LRSQWHLDGYIVSDCDSVGVFYNSQHYTSTPEEAAAMAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 770 Download |
MPSTSTLILS IFILLSAIHG RASRAPFACD PNNSVTTDYP FCRRSLVVGE RVKDLIGRLT 60 LEEKVKLLVS NAGGVPRLGI KAYQWWSEAL HGVSNVGPGT RFGGEFPAAT SFPQVISTAA 120 SFNASLWEAI GRVVSDEARA MYNGGVGGLT YWSPNVNIFR DPRWGRGQET PGEDPILAGT 180 YAVNYVRGLQ GTEGNRLKVA ACCKHFTAYD LDNWNGVDRF HFNAQVSKQD IEDTFEVPFR 240 MCVKGGKVSS VMCSYNQVNG VPTCADPNLL TNTLRSQWHL DGYIVSDCDS VGVFYNSQHY 300 TSTPEEAAAM AIKAGLDLDC GSFLETHTEN AVKRGLLNES HINGALSNTL SVQMRLGMFD 360 GDLKTQPYAH LGAKHVCSDH NRQLAVDAAR QGIVLLENRR GSLPLSTNRH RIVAVVGPNS 420 NATLTMIGNY AGIACEYITP LQGISKYTRT IHQEGCRGVA CRSNKFFGGA IEAARVADAV 480 VLVMGLDQSI EAEFRDRAGL LLPGLQPDLV LKVASVAKGP VILVLMSGGP IDVSFAKDHP 540 KISGIIWGGY PGQAGGLAIA DVLFGQTNPG GKLPMTWYPQ DYVSKLPMTT MSLRPGTSYP 600 GRTYRFYKGP VVYPFGHGLS YTAFTHKILS APTTLTVPVT GHRHPHNGSE FWGKAVRVTH 660 AKCDRLSLVI KVAVRNIGAR DGAHTLLVYS IPPMGVWVPQ KQLVAFEKVH IDAQALKEVQ 720 INIHVCKLLS VVDKYGIRRV PMGEHGIDIG DNVRHIVSLQ PQTLGIIKS* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-54 | 393 | 622 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 6.0e-55 | 58 | 444 | 414 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-64 | 60 | 352 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-76 | 110 | 723 | 670 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 23 | 760 | 761 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 7 | 769 | 4 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
DDBJ | BAG28345.1 | 0 | 23 | 741 | 24 | 743 | arabinofuranosidase [Citrus unshiu] |
RefSeq | NP_563659.1 | 0 | 7 | 769 | 9 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 2 | 769 | 7 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002515300.1 | 0 | 21 | 769 | 19 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 110 | 758 | 91 | 730 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u48_A | 0 | 110 | 758 | 91 | 730 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u4a_B | 0 | 110 | 758 | 91 | 730 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3u4a_A | 0 | 110 | 758 | 91 | 730 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 2x41_A | 5.60519e-45 | 50 | 756 | 2 | 705 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |