y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os11g19210.1 |
Family | GH3 |
Protein Properties | Length: 783 Molecular Weight: 83437.6 Isoelectric Point: 6.0464 |
Chromosome | Chromosome/Scaffold: 11 Start: 10972674 End: 10978707 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 84 | 335 | 0 |
AGVPRLGVPAYKWWSEALHGLATSGRGLHFDAPGSAARAATSFPQVLLTAAAFDDDLWFRIGQAIGTEARALYNIGQAEGLTMWSPNVNIFRDPRWGRGQ ETPGEDPTMASKYAVAFVKGMQGNSSAILQTSACCKHVTAYDLEDWNGVQRYNFNAKVTAQDLEDTYNPPFRSCVVDAKATCIMCAYTGINGVPACANAD LLTKTVRGDWGLDGYIASDCDAVAIMRDAQRYTQTPEDAVAVALKAGLDMNC |
Full Sequence |
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Protein Sequence Length: 783 Download |
MAAAAFSCCH GAGGMVVIVV VVMAMLGGVV AGGEPPFSCG GAAAGGGQGY AFCDATLPAE 60 QRAADLVARL TAAEKVAQLG DQAAGVPRLG VPAYKWWSEA LHGLATSGRG LHFDAPGSAA 120 RAATSFPQVL LTAAAFDDDL WFRIGQAIGT EARALYNIGQ AEGLTMWSPN VNIFRDPRWG 180 RGQETPGEDP TMASKYAVAF VKGMQGNSSA ILQTSACCKH VTAYDLEDWN GVQRYNFNAK 240 VTAQDLEDTY NPPFRSCVVD AKATCIMCAY TGINGVPACA NADLLTKTVR GDWGLDGYIA 300 SDCDAVAIMR DAQRYTQTPE DAVAVALKAG LDMNCGTYMQ QHATAAIQQG KLTEEDIDKA 360 LKNLFAIRMR LGHFDGDPRS NSVYGGLGAA DICTPEHRSL ALEAAMDGIV LLKNDAGILP 420 LDRTAVASAA VIGPNANDGL ALIGNYFGPP CESTTPLNGI LGYIKNVRFL AGCNSAACDV 480 AATDQAAAVA SSSDYVFLFM GLSQKQESEG RDRTSLLLPG EQQSLITAVA DAAKRPVILV 540 LLTGGPVDVT FAQTNPKIGA ILWAGYPGQA GGLAIARVLF GDHNPGGRLP VTWYPEEFTK 600 VPMTDMRMRA DPATGYPGRS YRFYQGKTVY KFGYGLSYSS YSRQLVSGGK PAESYTNLLA 660 SLRTTTTSEG DESYHIEEIG TDGCEQLKFP AVVEVQNHGP MDGKHSVLMY LRWPNAKGGR 720 PTTQLIGFRS QHLKVGEKAN IRFDISPCEH FSRVRKDGKK VIDRGSHYLM VDKDELEIRF 780 EA* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-52 | 409 | 639 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 7.0e-58 | 54 | 439 | 394 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-64 | 82 | 367 | 289 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-75 | 57 | 747 | 781 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 52 | 782 | 749 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005575 | cellular_component |
GO:0005576 | extracellular region |
GO:0005618 | cell wall |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX96800.1 | 0 | 34 | 781 | 108 | 852 | Glycosyl hydrolase family 3 C terminal domain, putative [Oryza sativa Japonica Group] |
GenBank | EAY80685.1 | 0 | 35 | 781 | 35 | 778 | hypothetical protein OsI_35867 [Oryza sativa Indica Group] |
GenBank | EAZ18145.1 | 0 | 192 | 782 | 1 | 591 | hypothetical protein OsJ_33695 [Oryza sativa Japonica Group] |
RefSeq | NP_001067726.1 | 0 | 1 | 782 | 1 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002489310.1 | 0 | 29 | 782 | 20 | 772 | hypothetical protein SORBIDRAFT_0010s010920 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 124 | 771 | 91 | 721 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3u48_A | 0 | 124 | 771 | 91 | 721 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3u4a_B | 0 | 124 | 771 | 91 | 721 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3u4a_A | 0 | 124 | 771 | 91 | 721 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 2x41_A | 1e-36 | 75 | 745 | 35 | 674 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |