y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 318716 |
Family | GH3 |
Protein Properties | Length: 866 Molecular Weight: 95039.5 Isoelectric Point: 8.9291 |
Chromosome | Chromosome/Scaffold: 3 Start: 8489820 End: 8493148 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 74 | 300 | 0 |
GVSRLGVPPYEWWSEALHGVSDVGPGVRFNGTVPGATSFPATILTAASFNTSLWLKMGEVVSTEARAMHNVGLAGLTYWSPNVNIFRDPRWGRGQETPGE DPLVVSKYAVNYVKGLQDVQDAGKSRRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQPPFKSCVEEGDVSSVMCSYNRVNGIPTCADPNL LRGVIRGQWRLDGYIVSDCDSIQVYFD |
Full Sequence |
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Protein Sequence Length: 866 Download |
MSVGRFVGVS LLIAALVSSL CESQKNFACD RNDPATAKYG FCNVSLSYEA RAKDLVSRLS 60 LKEKVQQLVN KATGVSRLGV PPYEWWSEAL HGVSDVGPGV RFNGTVPGAT SFPATILTAA 120 SFNTSLWLKM GEVVSTEARA MHNVGLAGLT YWSPNVNIFR DPRWGRGQET PGEDPLVVSK 180 YAVNYVKGLQ DVQDAGKSRR LKVSSCCKHY TAYDLDNWKG IDRFHFDAKV TKQDLEDTYQ 240 PPFKSCVEEG DVSSVMCSYN RVNGIPTCAD PNLLRGVIRG QWRLDGYIVS DCDSIQVYFD 300 DIHYTKTRLN MNCGDFLGKY TENAVKLKKL NGSEVDEALI YNYIVLMRLG FFDGDPKSLP 360 FGQLGPSDVC SKDHQMLALE AAKQGIVLLE NRGDLPLSKT AVKKIAVIGP NANATKVMIS 420 NYAGVPCKYT SPLQGLQKYV PEKVVYEPGC KDVNCGEQTL ISAAVKAVSE ADVTVLVVGL 480 DQTVEAEGLD RVNLTLPGYQ EKLVRDVANA AKKTVVLVIM SAGPIDISFA KNLSTISAVL 540 WVGYPGEAGG DAIAQVIFGD YNPSGRLPET WYSQEFADKV AMTDMNMRPN STSGFPGRSY 600 RFYTGKPIYK FGYGLSYSAF STFVLSAPSI IHIKTNPILN LNKTTSIDIS TVNCHDLKIR 660 IVIGVKNRGQ RSGSHVVLVF WKPPKCSKTL VGAGVPQTQL VGFERVEVGR SMTEKVTVEF 720 DVCKALSLVD THGKRKLVTG HHTLVIGSNS DQQIYHHLNV RLAGDSTKQR SLMEGLIPYL 780 IHAIKKDYKP DHQRYRSMSV GSSRSYRPLM MGQEGSSSMQ GSSHRRTRSD YNPPAIMDKS 840 DQRSSGFGQE FVNKDSSSQN IATKT* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-51 | 37 | 436 | 425 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-53 | 69 | 338 | 283 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-65 | 386 | 618 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-71 | 76 | 750 | 742 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 34 | 747 | 746 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 9.80909e-45 | 64 | 750 | 61 | 725 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
PDB | 3u48_A | 9.80909e-45 | 64 | 750 | 61 | 725 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
PDB | 3u4a_B | 6.02558e-44 | 110 | 750 | 91 | 725 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
PDB | 3u4a_A | 6.02558e-44 | 110 | 750 | 91 | 725 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
PDB | 2x41_A | 3e-35 | 51 | 764 | 3 | 709 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |