y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G093900.1 |
Family | GH3 |
Protein Properties | Length: 780 Molecular Weight: 86158.5 Isoelectric Point: 8.657 |
Chromosome | Chromosome/Scaffold: 02 Start: 6717053 End: 6721139 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 335 | 0 |
AIPRLGIPAYEWWSEALHGVALQTTVRQGIRFNGTIRFATSFPQVILTAASFDAHLWYRIGQVIGKEARGIYNAGQATGMTFWAPNINIFRDPRWGRGQE TPGEDPLVAGKYAVSYVRGVQGDSFGGGTLGEQLQASACCKHFTAYDLDKWKGMNRFVFDAQVTLQDLADTYQPPFQSCIQEGKASGIMCAYNRVNGVPN CADYNLLSKKARGQWGFYGYITSDCDAVAIIHDDQGYAKSPEDAVADVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 780 Download |
MRLQNLCLRI LILIAIHTTS LHLYVESTQP PYSCDSSDPS TKLYPFCQTK LPISQRVEDL 60 VSRLTLDEKV SQLVDTAPAI PRLGIPAYEW WSEALHGVAL QTTVRQGIRF NGTIRFATSF 120 PQVILTAASF DAHLWYRIGQ VIGKEARGIY NAGQATGMTF WAPNINIFRD PRWGRGQETP 180 GEDPLVAGKY AVSYVRGVQG DSFGGGTLGE QLQASACCKH FTAYDLDKWK GMNRFVFDAQ 240 VTLQDLADTY QPPFQSCIQE GKASGIMCAY NRVNGVPNCA DYNLLSKKAR GQWGFYGYIT 300 SDCDAVAIIH DDQGYAKSPE DAVADVLKAG MDVNCGDYLK NYTKSAVKKK KLPESEIDRA 360 LHNLFSIRMR LGLFNGNPTK QPYGNIAPDQ VCSQEHQALA LKAAQDGIVL LKNPDKLLPL 420 SKLETKSLAV IGPNANNSTK LLGNYFGPPC KTVTPLQGLQ NYIKNTRYHP GCSRVACSSA 480 SINQAVKIAK GADQVILVMG LDQTQEKEEQ DRVDLVLPGK QRELITAVAK AAKKPVVLVL 540 FCGGPVDVSF AKYDQNIGSI IWAGYPGEAG GTALAQIIFG DHNPGGRLPM TWYPQDFTKV 600 PMTDMRMRPQ LSSGYPGRTY RFYNGKKVFE FGYGLSYSNY SYELASDAQN KLYLRASSNQ 660 ITKNSNTIRH KLISNIGKEL CEKTKFTVTV RVKNHGEMAG KHPVLLFVRQ ANPGNERPIK 720 KLVGFQTVNL NAGENAEIQY ELSPCEHLSS PDDRGMMVME EGSQFLLIGD KEYPITIIF* 780 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-56 | 408 | 638 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-57 | 77 | 473 | 405 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-66 | 65 | 360 | 326 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-87 | 45 | 744 | 769 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 777 | 792 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 1 | 778 | 1 | 773 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 1 | 779 | 1 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 1 | 779 | 1 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 778 | 1 | 744 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 778 | 1 | 773 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 116 | 744 | 89 | 698 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3u48_A | 0 | 116 | 744 | 89 | 698 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3u4a_B | 0 | 116 | 744 | 89 | 698 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3u4a_A | 0 | 116 | 744 | 89 | 698 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2x41_A | 0 | 55 | 750 | 2 | 681 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |