dbCAN Logo

Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3405922_bin.6
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Mediterraneibacter
→
Species
Mediterraneibacter faecipullorum
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3405922_bin.6 3,378,397 95.12% 2.046% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3405922_bin.6_CGC8 CGCFAM_00093 Yes 5 4
ShaoY_2019_ERR3405922_bin.6_CGC11 CGCFAM_00100 Yes 13 1
ShaoY_2019_ERR3405922_bin.6_CGC39 CGCFAM_00117 Yes 4 1 alpha-glucan
ShaoY_2019_ERR3405922_bin.6_CGC10 CGCFAM_00199 Yes 8 4
ShaoY_2019_ERR3405922_bin.6_CGC32 CGCFAM_00206 Yes 8 4
ShaoY_2019_ERR3405922_bin.6_CGC31 CGCFAM_00419 Yes 10 4
ShaoY_2019_ERR3405922_bin.6_CGC18 CGCFAM_00506 Yes 9 1
ShaoY_2019_ERR3405922_bin.6_CGC4 CGCFAM_00745 Yes 6 1
ShaoY_2019_ERR3405922_bin.6_CGC9 CGCFAM_00907 Yes 6 1
ShaoY_2019_ERR3405922_bin.6_CGC2 CGCFAM_00926 Yes 9 2 fructan
ShaoY_2019_ERR3405922_bin.6_CGC33 CGCFAM_01634 Yes 14 2
ShaoY_2019_ERR3405922_bin.6_CGC34 CGCFAM_03411 Yes 7 1
ShaoY_2019_ERR3405922_bin.6_CGC21 CGCFAM_03894 Yes 8 1
ShaoY_2019_ERR3405922_bin.6_CGC30 CGCFAM_05420 Yes 7 1
ShaoY_2019_ERR3405922_bin.6_CGC24 CGCFAM_05450 Yes 4 1
ShaoY_2019_ERR3405922_bin.6_CGC5 CGCFAM_07185 Yes 3 2
ShaoY_2019_ERR3405922_bin.6_CGC15 CGCFAM_07559 Yes 6 3
Top CAZyme Families