Cluster: ShaoY_2019_ERR3405922_bin.6_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- CGC Family ID: CGCFAM_05420
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405922_bin.6_k141_19108 | ShaoY_2019_ERR3405922_bin.6_k141_19108_94 | 108340 | 109002 | - | 2.A.66.1.32 |
| pfam | ShaoY_2019_ERR3405922_bin.6_k141_19108 | ShaoY_2019_ERR3405922_bin.6_k141_19108_95 | 109364 | 110536 | - | CbiG_C | CbiG_N | CbiG_mid |
| TF | ShaoY_2019_ERR3405922_bin.6_k141_19108 | ShaoY_2019_ERR3405922_bin.6_k141_19108_96 | 110597 | 111055 | - | HTH_11 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_19108 | ShaoY_2019_ERR3405922_bin.6_k141_19108_97 | 111210 | 112544 | + | 2.A.66.1.26 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_19108 | ShaoY_2019_ERR3405922_bin.6_k141_19108_98 | 112600 | 113715 | - | GH18 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_19108 | ShaoY_2019_ERR3405922_bin.6_k141_19108_99 | 113770 | 115626 | - | 3.A.1.135.9 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_19108 | ShaoY_2019_ERR3405922_bin.6_k141_19108_100 | 115628 | 117361 | - | 3.A.1.135.9 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_19108_94
Type: TC
Location: 108340 - 109002 (-)
Type: TC
Location: 108340 - 109002 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_19108_95
Type: pfam
Location: 109364 - 110536 (-)
Type: pfam
Location: 109364 - 110536 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_19108_96
Type: TF
Location: 110597 - 111055 (-)
Type: TF
Location: 110597 - 111055 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_19108_97
Type: TC
Location: 111210 - 112544 (+)
Type: TC
Location: 111210 - 112544 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_19108_98
Type: CAZyme
Location: 112600 - 113715 (-)
Type: CAZyme
Location: 112600 - 113715 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_19108_99
Type: TC
Location: 113770 - 115626 (-)
Type: TC
Location: 113770 - 115626 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_19108_100
Type: TC
Location: 115628 - 117361 (-)
Type: TC
Location: 115628 - 117361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.