Cluster: ShaoY_2019_ERR3405922_bin.6_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- CGC Family ID: CGCFAM_00093
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_215 | 217223 | 219502 | + | GH3 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_216 | 219543 | 220949 | + | 2.A.2.3.4 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_217 | 221025 | 222554 | + | GH43_35 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_218 | 222541 | 225270 | + | CBM67 | GH78 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_219 | 225275 | 228058 | + | CBM67 | GH78 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_215
Type: CAZyme
Location: 217223 - 219502 (+)
Type: CAZyme
Location: 217223 - 219502 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_216
Type: TC
Location: 219543 - 220949 (+)
Type: TC
Location: 219543 - 220949 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_217
Type: CAZyme
Location: 221025 - 222554 (+)
Type: CAZyme
Location: 221025 - 222554 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_218
Type: CAZyme
Location: 222541 - 225270 (+)
Type: CAZyme
Location: 222541 - 225270 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_219
Type: CAZyme
Location: 225275 - 228058 (+)
Type: CAZyme
Location: 225275 - 228058 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.