Cluster: ShaoY_2019_ERR3405922_bin.6_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- CGC Family ID: CGCFAM_05450
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_12143 | ShaoY_2019_ERR3405922_bin.6_k141_12143_13 | 13118 | 15514 | - | GH31_4 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_12143 | ShaoY_2019_ERR3405922_bin.6_k141_12143_14 | 15546 | 16376 | - | 3.A.1.1.41 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_12143 | ShaoY_2019_ERR3405922_bin.6_k141_12143_15 | 16376 | 17251 | - | 3.A.1.1.7 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_12143 | ShaoY_2019_ERR3405922_bin.6_k141_12143_16 | 17412 | 19235 | + | 9.B.33.1.1 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_12143_13
Type: CAZyme
Location: 13118 - 15514 (-)
Type: CAZyme
Location: 13118 - 15514 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_12143_14
Type: TC
Location: 15546 - 16376 (-)
Type: TC
Location: 15546 - 16376 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_12143_15
Type: TC
Location: 16376 - 17251 (-)
Type: TC
Location: 16376 - 17251 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_12143_16
Type: TC
Location: 17412 - 19235 (+)
Type: TC
Location: 17412 - 19235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.