Cluster: ShaoY_2019_ERR3405922_bin.6_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- CGC Family ID: CGCFAM_07185
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_87 | 77478 | 79580 | + | GH3 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_88 | 79606 | 80241 | + | 9.B.28.1.2 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_4649 | ShaoY_2019_ERR3405922_bin.6_k141_4649_89 | 80234 | 81736 | + | GH51_1 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_87
Type: CAZyme
Location: 77478 - 79580 (+)
Type: CAZyme
Location: 77478 - 79580 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_88
Type: TC
Location: 79606 - 80241 (+)
Type: TC
Location: 79606 - 80241 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_4649_89
Type: CAZyme
Location: 80234 - 81736 (+)
Type: CAZyme
Location: 80234 - 81736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.