Cluster: ShaoY_2019_ERR3405922_bin.6_CGC15

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	ShaoY_2019_ERR3405922_bin.6_k141_7218	ShaoY_2019_ERR3405922_bin.6_k141_7218_2	764	2809	+	GH133
CAZyme	ShaoY_2019_ERR3405922_bin.6_k141_7218	ShaoY_2019_ERR3405922_bin.6_k141_7218_3	2837	4591	+	CBM34 \| GH13_20
CAZyme	ShaoY_2019_ERR3405922_bin.6_k141_7218	ShaoY_2019_ERR3405922_bin.6_k141_7218_4	4623	6266	+	GH13_31
NULL(UNKNOWN)	ShaoY_2019_ERR3405922_bin.6_k141_7218	ShaoY_2019_ERR3405922_bin.6_k141_7218_5	6665	6763	+	NULL(UNKNOWN) [View Structural Homologs]
pfam	ShaoY_2019_ERR3405922_bin.6_k141_7218	ShaoY_2019_ERR3405922_bin.6_k141_7218_6	6760	8661	+	tRNA-synt_2b \| TGS \| HGTP_anticodon \| tRNA_SAD
TC	ShaoY_2019_ERR3405922_bin.6_k141_7218	ShaoY_2019_ERR3405922_bin.6_k141_7218_7	9547	10959	+	2.A.25.1.4

Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_2
Type: CAZyme
Location: 764 - 2809 (+)

Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_3
Type: CAZyme
Location: 2837 - 4591 (+)

Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_4
Type: CAZyme
Location: 4623 - 6266 (+)

Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_5
Type:
Location: 6665 - 6763 (+)

Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_6
Type: pfam
Location: 6760 - 8661 (+)

Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_7
Type: TC
Location: 9547 - 10959 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
ShaoY_2019_ERR3405922_bin.6_k141_7218_7	vegetarian > vegan	1.06471	0.00229