Cluster: ShaoY_2019_ERR3405922_bin.6_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- CGC Family ID: CGCFAM_03411
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405922_bin.6_k141_20667 | ShaoY_2019_ERR3405922_bin.6_k141_20667_97 | 116132 | 116884 | - | 9.B.158.1.1 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_20667 | ShaoY_2019_ERR3405922_bin.6_k141_20667_98 | 117131 | 118480 | + | GH29 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_20667 | ShaoY_2019_ERR3405922_bin.6_k141_20667_99 | 118484 | 119374 | + | 4.A.6.1.13 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_20667 | ShaoY_2019_ERR3405922_bin.6_k141_20667_100 | 119410 | 120213 | + | 4.A.6.1.13 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_20667 | ShaoY_2019_ERR3405922_bin.6_k141_20667_101 | 120194 | 121012 | + | 4.A.6.1.13 |
| STP | ShaoY_2019_ERR3405922_bin.6_k141_20667 | ShaoY_2019_ERR3405922_bin.6_k141_20667_102 | 121037 | 121741 | + | SIS |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_20667 | ShaoY_2019_ERR3405922_bin.6_k141_20667_103 | 121819 | 123150 | - | 1.A.26.1.3 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_20667_97
Type: TC
Location: 116132 - 116884 (-)
Type: TC
Location: 116132 - 116884 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_20667_98
Type: CAZyme
Location: 117131 - 118480 (+)
Type: CAZyme
Location: 117131 - 118480 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_20667_99
Type: TC
Location: 118484 - 119374 (+)
Type: TC
Location: 118484 - 119374 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_20667_100
Type: TC
Location: 119410 - 120213 (+)
Type: TC
Location: 119410 - 120213 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_20667_101
Type: TC
Location: 120194 - 121012 (+)
Type: TC
Location: 120194 - 121012 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_20667_102
Type: STP
Location: 121037 - 121741 (+)
Type: STP
Location: 121037 - 121741 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_20667_103
Type: TC
Location: 121819 - 123150 (-)
Type: TC
Location: 121819 - 123150 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.