Cluster: ShaoY_2019_ERR3405922_bin.6_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- CGC Family ID: CGCFAM_00199
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_2 | 1735 | 2847 | - | CE1 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_3 | 2850 | 3641 | - | CE1 |
| STP | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_4 | 3660 | 5255 | - | SBP_bac_1 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_5 | 5296 | 7269 | - | GH13_4 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_6 | 7379 | 9562 | - | GH36 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_7 | 9675 | 10517 | - | 3.A.1.1.28 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_8 | 10517 | 11389 | - | 3.A.1.1.28 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_5068 | ShaoY_2019_ERR3405922_bin.6_k141_5068_9 | 11408 | 12691 | - | 3.A.1.1.28 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_2
Type: CAZyme
Location: 1735 - 2847 (-)
Type: CAZyme
Location: 1735 - 2847 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_3
Type: CAZyme
Location: 2850 - 3641 (-)
Type: CAZyme
Location: 2850 - 3641 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_4
Type: STP
Location: 3660 - 5255 (-)
Type: STP
Location: 3660 - 5255 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_5
Type: CAZyme
Location: 5296 - 7269 (-)
Type: CAZyme
Location: 5296 - 7269 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_6
Type: CAZyme
Location: 7379 - 9562 (-)
Type: CAZyme
Location: 7379 - 9562 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_7
Type: TC
Location: 9675 - 10517 (-)
Type: TC
Location: 9675 - 10517 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_8
Type: TC
Location: 10517 - 11389 (-)
Type: TC
Location: 10517 - 11389 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_5068_9
Type: TC
Location: 11408 - 12691 (-)
Type: TC
Location: 11408 - 12691 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.