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Genome Details

Selected Rep_genome_ID: Rep_490
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides thetaiotaomicron
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A58.bin_6 6,031,310 99.46% 0.08% China(Inner Mongolia) Asia IMGG
BF194_bin.5 6,057,052 99.41% 0.08% NA Africa H3AfricaPhase2
CGMR068028 5,720,273 99.14% 0.35% China Asia CGMR
Rep_490 6,220,636 99.4144% 0.0809062% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_490_CGC54 CGCFAM_00363 Yes 17 5
PUL0376_Rep_490_C0 CGCFAM_00439 Yes 9 2 host glycan
Rep_490_CGC89 CGCFAM_00480 Yes 9 7 pectin/host glycan
PUL0688_Rep_490_C0 CGCFAM_00535 Yes 4 1 galactan
Rep_490_CGC15 CGCFAM_00602 Yes 9 1
Rep_490_CGC108 CGCFAM_00629 Yes 5 1
Rep_490_CGC103 CGCFAM_00667 Yes 13 2
PUL0382_Rep_490_C0 CGCFAM_00720 Yes 10 4 host glycan
Rep_490_CGC61 CGCFAM_00720 Yes 14 5 host glycan
Rep_490_CGC76 CGCFAM_00840 Yes 7 2
Rep_490_CGC59 CGCFAM_00982 Yes 22 7
Rep_490_CGC105 CGCFAM_00986 Yes 12 3
Rep_490_CGC71 CGCFAM_01190 Yes 4 1
Rep_490_CGC96 CGCFAM_01248 Yes 10 6 pectin
Rep_490_CGC53 CGCFAM_01310 Yes 8 3
Rep_490_CGC84 CGCFAM_01545 Yes 6 1
Rep_490_CGC72 CGCFAM_01552 Yes 4 1
Rep_490_CGC58 CGCFAM_01567 Yes 8 4
Rep_490_CGC43 CGCFAM_01917 Yes 19 10
Rep_490_CGC47 CGCFAM_02229 Yes 35 18
Rep_490_CGC34 CGCFAM_02278 Yes 14 7
PUL0384_Rep_490_C0 CGCFAM_02295 Yes 12 4 host glycan
Rep_490_CGC73 CGCFAM_02295 Yes 9 3 host glycan
Rep_490_CGC36 CGCFAM_02746 Yes 4 1
Rep_490_CGC9 CGCFAM_02823 Yes 12 6
Top CAZyme Families