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Cluster: Rep_490_CGC103

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_490_c_4 Rep_490_c_4_157 185062 185793 - 3.A.1.11.8
pfam Rep_490_c_4 Rep_490_c_4_158 185790 186437 - SBP_bac_6
TC Rep_490_c_4 Rep_490_c_4_159 186434 187231 - 3.A.1.11.8
TC Rep_490_c_4 Rep_490_c_4_160 187225 188025 - 3.A.1.11.8
TC Rep_490_c_4 Rep_490_c_4_161 188037 189458 - 3.A.1.11.8
pfam Rep_490_c_4 Rep_490_c_4_162 189568 190668 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
CAZyme Rep_490_c_4 Rep_490_c_4_163 191026 193590 - GT35
CAZyme Rep_490_c_4 Rep_490_c_4_164 193629 195290 - GT3
TC Rep_490_c_4 Rep_490_c_4_165 195496 195957 - 3.A.2.2.2
TC Rep_490_c_4 Rep_490_c_4_166 196010 197833 - 3.A.2.2.2
pfam Rep_490_c_4 Rep_490_c_4_167 197830 198435 - ATP-synt_D
TC Rep_490_c_4 Rep_490_c_4_168 198476 199801 - 3.A.2.3.3
TC Rep_490_c_4 Rep_490_c_4_169 199835 201592 - 3.A.2.3.3
Gene ID: Rep_490_c_4_157
Type: TC
Location: 185062 - 185793 (-)
Gene ID: Rep_490_c_4_158
Type: pfam
Location: 185790 - 186437 (-)
Gene ID: Rep_490_c_4_159
Type: TC
Location: 186434 - 187231 (-)
Gene ID: Rep_490_c_4_160
Type: TC
Location: 187225 - 188025 (-)
Gene ID: Rep_490_c_4_161
Type: TC
Location: 188037 - 189458 (-)
Gene ID: Rep_490_c_4_162
Type: pfam
Location: 189568 - 190668 (+)
Gene ID: Rep_490_c_4_163
Type: CAZyme
Location: 191026 - 193590 (-)
Gene ID: Rep_490_c_4_164
Type: CAZyme
Location: 193629 - 195290 (-)
Gene ID: Rep_490_c_4_165
Type: TC
Location: 195496 - 195957 (-)
Gene ID: Rep_490_c_4_166
Type: TC
Location: 196010 - 197833 (-)
Gene ID: Rep_490_c_4_167
Type: pfam
Location: 197830 - 198435 (-)
Gene ID: Rep_490_c_4_168
Type: TC
Location: 198476 - 199801 (-)
Gene ID: Rep_490_c_4_169
Type: TC
Location: 199835 - 201592 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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