Cluster: Rep_490_CGC84
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_01545
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_490_c_2 | Rep_490_c_2_3631 | 4803890 | 4805494 | + | 1.B.9.4.2 |
| TC | Rep_490_c_2 | Rep_490_c_2_3632 | 4805807 | 4808995 | + | 1.B.14.6.13 |
| TC | Rep_490_c_2 | Rep_490_c_2_3633 | 4809015 | 4810616 | + | 8.A.46.2.2 |
| pfam | Rep_490_c_2 | Rep_490_c_2_3634 | 4810764 | 4811567 | - | Mfa_like_1 |
| pfam | Rep_490_c_2 | Rep_490_c_2_3635 | 4811605 | 4812057 | - | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_3636 | 4812197 | 4813183 | - | GH109 |
Gene ID: Rep_490_c_2_3631
Type: TC
Location: 4803890 - 4805494 (+)
Type: TC
Location: 4803890 - 4805494 (+)
Gene ID: Rep_490_c_2_3632
Type: TC
Location: 4805807 - 4808995 (+)
Type: TC
Location: 4805807 - 4808995 (+)
Gene ID: Rep_490_c_2_3633
Type: TC
Location: 4809015 - 4810616 (+)
Type: TC
Location: 4809015 - 4810616 (+)
Gene ID: Rep_490_c_2_3634
Type: pfam
Location: 4810764 - 4811567 (-)
Type: pfam
Location: 4810764 - 4811567 (-)
Gene ID: Rep_490_c_2_3635
Type: pfam
Location: 4811605 - 4812057 (-)
Type: pfam
Location: 4811605 - 4812057 (-)
Gene ID: Rep_490_c_2_3636
Type: CAZyme
Location: 4812197 - 4813183 (-)
Type: CAZyme
Location: 4812197 - 4813183 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.