Cluster: Rep_490_CGC43
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 10
- Substrate:
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_01917
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2180 | 2854394 | 2856208 | - | GH2 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2181 | 2856504 | 2859452 | + | GH115 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2182 | 2859449 | 2860561 | - | GH43_26 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2183 | 2860728 | 2862641 | + | GH43_3 | GH43_34 |
| STP | Rep_490_c_2 | Rep_490_c_2_2184 | 2862897 | 2863469 | + | Sigma70_r2 | Sigma70_r4_2 |
| STP | Rep_490_c_2 | Rep_490_c_2_2185 | 2863583 | 2864785 | + | FecR |
| TC | Rep_490_c_2 | Rep_490_c_2_2186 | 2864922 | 2868377 | + | 1.B.14.6.1 |
| pfam | Rep_490_c_2 | Rep_490_c_2_2187 | 2868390 | 2870318 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2188 | 2870347 | 2871633 | + | GH76 |
| pfam | Rep_490_c_2 | Rep_490_c_2_2189 | 2871659 | 2872819 | + | Laminin_G_3 | DUF4972 |
| pfam | Rep_490_c_2 | Rep_490_c_2_2190 | 2872834 | 2874309 | + | DUF4972 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2191 | 2874531 | 2875793 | + | GH76 |
| NULL(UNKNOWN) | Rep_490_c_2 | Rep_490_c_2_2192 | 2875829 | 2878015 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | Rep_490_c_2 | Rep_490_c_2_2193 | 2878045 | 2880522 | + | S1_4 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2194 | 2880535 | 2882826 | + | GH92 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2195 | 2882830 | 2884293 | + | GH125 |
| sulfatase | Rep_490_c_2 | Rep_490_c_2_2196 | 2884303 | 2885436 | + | S1_22 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2197 | 2885568 | 2887583 | + | GH92 | GH92 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_2198 | 2887642 | 2889705 | + | GH127 |
Gene ID: Rep_490_c_2_2180
Type: CAZyme
Location: 2854394 - 2856208 (-)
Type: CAZyme
Location: 2854394 - 2856208 (-)
Gene ID: Rep_490_c_2_2181
Type: CAZyme
Location: 2856504 - 2859452 (+)
Type: CAZyme
Location: 2856504 - 2859452 (+)
Gene ID: Rep_490_c_2_2182
Type: CAZyme
Location: 2859449 - 2860561 (-)
Type: CAZyme
Location: 2859449 - 2860561 (-)
Gene ID: Rep_490_c_2_2183
Type: CAZyme
Location: 2860728 - 2862641 (+)
Type: CAZyme
Location: 2860728 - 2862641 (+)
Gene ID: Rep_490_c_2_2184
Type: STP
Location: 2862897 - 2863469 (+)
Type: STP
Location: 2862897 - 2863469 (+)
Gene ID: Rep_490_c_2_2185
Type: STP
Location: 2863583 - 2864785 (+)
Type: STP
Location: 2863583 - 2864785 (+)
Gene ID: Rep_490_c_2_2186
Type: TC
Location: 2864922 - 2868377 (+)
Type: TC
Location: 2864922 - 2868377 (+)
Gene ID: Rep_490_c_2_2187
Type: pfam
Location: 2868390 - 2870318 (+)
Type: pfam
Location: 2868390 - 2870318 (+)
Gene ID: Rep_490_c_2_2188
Type: CAZyme
Location: 2870347 - 2871633 (+)
Type: CAZyme
Location: 2870347 - 2871633 (+)
Gene ID: Rep_490_c_2_2189
Type: pfam
Location: 2871659 - 2872819 (+)
Type: pfam
Location: 2871659 - 2872819 (+)
Gene ID: Rep_490_c_2_2190
Type: pfam
Location: 2872834 - 2874309 (+)
Type: pfam
Location: 2872834 - 2874309 (+)
Gene ID: Rep_490_c_2_2191
Type: CAZyme
Location: 2874531 - 2875793 (+)
Type: CAZyme
Location: 2874531 - 2875793 (+)
Gene ID: Rep_490_c_2_2192
Type:
Location: 2875829 - 2878015 (+)
Type:
Location: 2875829 - 2878015 (+)
Gene ID: Rep_490_c_2_2193
Type: sulfatase
Location: 2878045 - 2880522 (+)
Type: sulfatase
Location: 2878045 - 2880522 (+)
Gene ID: Rep_490_c_2_2194
Type: CAZyme
Location: 2880535 - 2882826 (+)
Type: CAZyme
Location: 2880535 - 2882826 (+)
Gene ID: Rep_490_c_2_2195
Type: CAZyme
Location: 2882830 - 2884293 (+)
Type: CAZyme
Location: 2882830 - 2884293 (+)
Gene ID: Rep_490_c_2_2196
Type: sulfatase
Location: 2884303 - 2885436 (+)
Type: sulfatase
Location: 2884303 - 2885436 (+)
Gene ID: Rep_490_c_2_2197
Type: CAZyme
Location: 2885568 - 2887583 (+)
Type: CAZyme
Location: 2885568 - 2887583 (+)
Gene ID: Rep_490_c_2_2198
Type: CAZyme
Location: 2887642 - 2889705 (+)
Type: CAZyme
Location: 2887642 - 2889705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.