Cluster: PUL0382_Rep_490_C0
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: Rep_490
- CGC Family ID: CGCFAM_00720
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0382_Rep_490_C0 | Rep_490_c_2_2919 | 3878772 | 3879863 | - | APH |
| CAZyme | PUL0382_Rep_490_C0 | Rep_490_c_2_2920 | 3879893 | 3883267 | - | GH2 |
| TC | PUL0382_Rep_490_C0 | Rep_490_c_2_2921 | 3883291 | 3884217 | - | 2.A.115.1.1 |
| CAZyme | PUL0382_Rep_490_C0 | Rep_490_c_2_2922 | 3884290 | 3885693 | - | GH109 |
| CAZyme | PUL0382_Rep_490_C0 | Rep_490_c_2_2923 | 3885927 | 3888500 | - | CBM32 |
| CAZyme | PUL0382_Rep_490_C0 | Rep_490_c_2_2924 | 3888583 | 3889875 | - | CBM32 |
| pfam | PUL0382_Rep_490_C0 | Rep_490_c_2_2925 | 3889912 | 3891852 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0382_Rep_490_C0 | Rep_490_c_2_2926 | 3891859 | 3895212 | - | 1.B.14.6.1 |
| STP | PUL0382_Rep_490_C0 | Rep_490_c_2_2927 | 3895263 | 3896201 | - | FecR |
| TF | PUL0382_Rep_490_C0 | Rep_490_c_2_2928 | 3896546 | 3897091 | + | HTH_11 |
Gene ID: Rep_490_c_2_2919
Type: pfam
Location: 3878772 - 3879863 (-)
Type: pfam
Location: 3878772 - 3879863 (-)
Gene ID: Rep_490_c_2_2920
Type: CAZyme
Location: 3879893 - 3883267 (-)
Type: CAZyme
Location: 3879893 - 3883267 (-)
Gene ID: Rep_490_c_2_2921
Type: TC
Location: 3883291 - 3884217 (-)
Type: TC
Location: 3883291 - 3884217 (-)
Gene ID: Rep_490_c_2_2922
Type: CAZyme
Location: 3884290 - 3885693 (-)
Type: CAZyme
Location: 3884290 - 3885693 (-)
Gene ID: Rep_490_c_2_2923
Type: CAZyme
Location: 3885927 - 3888500 (-)
Type: CAZyme
Location: 3885927 - 3888500 (-)
Gene ID: Rep_490_c_2_2924
Type: CAZyme
Location: 3888583 - 3889875 (-)
Type: CAZyme
Location: 3888583 - 3889875 (-)
Gene ID: Rep_490_c_2_2925
Type: pfam
Location: 3889912 - 3891852 (-)
Type: pfam
Location: 3889912 - 3891852 (-)
Gene ID: Rep_490_c_2_2926
Type: TC
Location: 3891859 - 3895212 (-)
Type: TC
Location: 3891859 - 3895212 (-)
Gene ID: Rep_490_c_2_2927
Type: STP
Location: 3895263 - 3896201 (-)
Type: STP
Location: 3895263 - 3896201 (-)
Gene ID: Rep_490_c_2_2928
Type: TF
Location: 3896546 - 3897091 (+)
Type: TF
Location: 3896546 - 3897091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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