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Cluster: Rep_490_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_490_c_2 Rep_490_c_2_2649 3484637 3486922 + GH92
CAZyme Rep_490_c_2 Rep_490_c_2_2650 3486929 3489268 + GH92
pfam Rep_490_c_2 Rep_490_c_2_2651 3489298 3490092 + BSP
CAZyme Rep_490_c_2 Rep_490_c_2_2652 3490139 3492445 + GH92
TF Rep_490_c_2 Rep_490_c_2_2653 3492576 3493388 - LytTR
TC Rep_490_c_2 Rep_490_c_2_2654 3493385 3494443 - 8.A.59.2.1
TC Rep_490_c_2 Rep_490_c_2_2655 3494506 3495498 - 2.A.6.2.20
TC Rep_490_c_2 Rep_490_c_2_2656 3495512 3499837 - 2.A.6.1.2
Gene ID: Rep_490_c_2_2649
Type: CAZyme
Location: 3484637 - 3486922 (+)
Gene ID: Rep_490_c_2_2650
Type: CAZyme
Location: 3486929 - 3489268 (+)
Gene ID: Rep_490_c_2_2651
Type: pfam
Location: 3489298 - 3490092 (+)
Gene ID: Rep_490_c_2_2652
Type: CAZyme
Location: 3490139 - 3492445 (+)
Gene ID: Rep_490_c_2_2653
Type: TF
Location: 3492576 - 3493388 (-)
Gene ID: Rep_490_c_2_2654
Type: TC
Location: 3493385 - 3494443 (-)
Gene ID: Rep_490_c_2_2655
Type: TC
Location: 3494506 - 3495498 (-)
Gene ID: Rep_490_c_2_2656
Type: TC
Location: 3495512 - 3499837 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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