Genome Details
Selected Rep_genome_ID: HRGMv2_3176
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3176 | 2,812,563 | 97.98% | 0% | South Korea | Asia | HRGM |
| MGYG000004384 | 2,222,403 | 94.52% | 0.02% | Israel | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3176_CGC1 | CGCFAM_00195 | Yes | 4 | 1 | |
| HRGMv2_3176_CGC4 | CGCFAM_00281 | Yes | 13 | 5 | |
| HRGMv2_3176_CGC23 | CGCFAM_00317 | Yes | 8 | 2 | |
| HRGMv2_3176_CGC17 | CGCFAM_00917 | Yes | 4 | 1 | |
| HRGMv2_3176_CGC5 | CGCFAM_01037 | Yes | 6 | 2 | |
| HRGMv2_3176_CGC22 | CGCFAM_01097 | Yes | 3 | 2 | |
| HRGMv2_3176_CGC2 | CGCFAM_01574 | Yes | 5 | 1 | |
| HRGMv2_3176_CGC12 | CGCFAM_01756 | Yes | 7 | 1 | |
| HRGMv2_3176_CGC32 | CGCFAM_01945 | Yes | 6 | 1 | |
| HRGMv2_3176_CGC27 | CGCFAM_01951 | Yes | 4 | 2 | |
| HRGMv2_3176_CGC25 | CGCFAM_02444 | Yes | 5 | 2 | |
| HRGMv2_3176_CGC30 | CGCFAM_02510 | Yes | 4 | 2 | |
| HRGMv2_3176_CGC11 | CGCFAM_02919 | Yes | 3 | 2 | |
| HRGMv2_3176_CGC13 | CGCFAM_04494 | Yes | 5 | 3 | |
| HRGMv2_3176_CGC29 | CGCFAM_07283 | Yes | 3 | 1 | |
| HRGMv2_3176_CGC16 | CGCFAM_10317 | Yes | 4 | 1 | |
| HRGMv2_3176_CGC24 | CGCFAM_10318 | Yes | 7 | 2 | |
| HRGMv2_3176_CGC28 | CGCFAM_10319 | Yes | 4 | 2 | |
| HRGMv2_3176_CGC3 | CGCFAM_10320 | Yes | 3 | 1 | |
| HRGMv2_3176_CGC31 | CGCFAM_10321 | Yes | 4 | 1 |
Top CAZyme Families