Cluster: HRGMv2_3176_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_10317
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3176_4 | HRGMv2_3176_4_51 | 51062 | 53587 | + | 3.A.3.5.15 |
| TF | HRGMv2_3176_4 | HRGMv2_3176_4_52 | 53648 | 54655 | - | LacI |
| pfam | HRGMv2_3176_4 | HRGMv2_3176_4_53 | 54666 | 55043 | - | YjbR |
| CAZyme | HRGMv2_3176_4 | HRGMv2_3176_4_54 | 55562 | 59497 | + | CBM23 | GH5_8 | GH5_8 |
Gene ID: HRGMv2_3176_4_51
Type: TC
Location: 51062 - 53587 (+)
Type: TC
Location: 51062 - 53587 (+)
Gene ID: HRGMv2_3176_4_52
Type: TF
Location: 53648 - 54655 (-)
Type: TF
Location: 53648 - 54655 (-)
Gene ID: HRGMv2_3176_4_53
Type: pfam
Location: 54666 - 55043 (-)
Type: pfam
Location: 54666 - 55043 (-)
Gene ID: HRGMv2_3176_4_54
Type: CAZyme
Location: 55562 - 59497 (+)
Type: CAZyme
Location: 55562 - 59497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.