Cluster: HRGMv2_3176_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_01574
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_1 | HRGMv2_3176_1_50 | 51489 | 53717 | - | CBM35 | CBM80 | GH26 |
| peptidase | HRGMv2_3176_1 | HRGMv2_3176_1_51 | 53991 | 54698 | + | S14.UPW |
| TC | HRGMv2_3176_1 | HRGMv2_3176_1_52 | 54768 | 57302 | + | 3.A.12.1.1 |
| pfam | HRGMv2_3176_1 | HRGMv2_3176_1_53 | 57305 | 59281 | + | Radical_SAM_N | DUF3362 |
| TC | HRGMv2_3176_1 | HRGMv2_3176_1_54 | 59434 | 60129 | + | 3.A.11.1.4 |
Gene ID: HRGMv2_3176_1_50
Type: CAZyme
Location: 51489 - 53717 (-)
Type: CAZyme
Location: 51489 - 53717 (-)
Gene ID: HRGMv2_3176_1_51
Type: peptidase
Location: 53991 - 54698 (+)
Type: peptidase
Location: 53991 - 54698 (+)
Gene ID: HRGMv2_3176_1_52
Type: TC
Location: 54768 - 57302 (+)
Type: TC
Location: 54768 - 57302 (+)
Gene ID: HRGMv2_3176_1_53
Type: pfam
Location: 57305 - 59281 (+)
Type: pfam
Location: 57305 - 59281 (+)
Gene ID: HRGMv2_3176_1_54
Type: TC
Location: 59434 - 60129 (+)
Type: TC
Location: 59434 - 60129 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.