Cluster: HRGMv2_3176_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_04494
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_2 | HRGMv2_3176_2_341 | 388545 | 390614 | - | CBM79 | CBM79 | GH5_4 |
| pfam | HRGMv2_3176_2 | HRGMv2_3176_2_342 | 390873 | 392348 | + | DUF1846 | DUF1846_C |
| TC | HRGMv2_3176_2 | HRGMv2_3176_2_343 | 392804 | 394153 | + | 9.B.160.1.10 |
| CAZyme | HRGMv2_3176_2 | HRGMv2_3176_2_344 | 394362 | 398108 | + | CBM77 | PL1 | PL9_1 |
| CAZyme | HRGMv2_3176_2 | HRGMv2_3176_2_345 | 398239 | 400554 | - | GH31_3 |
Gene ID: HRGMv2_3176_2_341
Type: CAZyme
Location: 388545 - 390614 (-)
Type: CAZyme
Location: 388545 - 390614 (-)
Gene ID: HRGMv2_3176_2_342
Type: pfam
Location: 390873 - 392348 (+)
Type: pfam
Location: 390873 - 392348 (+)
Gene ID: HRGMv2_3176_2_343
Type: TC
Location: 392804 - 394153 (+)
Type: TC
Location: 392804 - 394153 (+)
Gene ID: HRGMv2_3176_2_344
Type: CAZyme
Location: 394362 - 398108 (+)
Type: CAZyme
Location: 394362 - 398108 (+)
Gene ID: HRGMv2_3176_2_345
Type: CAZyme
Location: 398239 - 400554 (-)
Type: CAZyme
Location: 398239 - 400554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.