Cluster: HRGMv2_3176_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_02919
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_2 | HRGMv2_3176_2_272 | 303072 | 304928 | + | CBM35 | GH26 |
| CAZyme | HRGMv2_3176_2 | HRGMv2_3176_2_273 | 305069 | 306772 | + | GH5_1 |
| TC | HRGMv2_3176_2 | HRGMv2_3176_2_274 | 306860 | 308458 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_3176_2_272
Type: CAZyme
Location: 303072 - 304928 (+)
Type: CAZyme
Location: 303072 - 304928 (+)
Gene ID: HRGMv2_3176_2_273
Type: CAZyme
Location: 305069 - 306772 (+)
Type: CAZyme
Location: 305069 - 306772 (+)
Gene ID: HRGMv2_3176_2_274
Type: TC
Location: 306860 - 308458 (+)
Type: TC
Location: 306860 - 308458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.