Cluster: HRGMv2_3176_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_02510
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_15 | HRGMv2_3176_15_40 | 41738 | 45541 | + | CBM22 | GH10 | GH43_16 |
| CAZyme | HRGMv2_3176_15 | HRGMv2_3176_15_41 | 45828 | 48686 | + | CBM22 | CE1 | GH30_8 |
| NULL(UNKNOWN) | HRGMv2_3176_15 | HRGMv2_3176_15_42 | 48754 | 49299 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3176_15 | HRGMv2_3176_15_43 | 49712 | 51262 | + | 3.A.1.120.6 |
Gene ID: HRGMv2_3176_15_40
Type: CAZyme
Location: 41738 - 45541 (+)
Type: CAZyme
Location: 41738 - 45541 (+)
Gene ID: HRGMv2_3176_15_41
Type: CAZyme
Location: 45828 - 48686 (+)
Type: CAZyme
Location: 45828 - 48686 (+)
Gene ID: HRGMv2_3176_15_42
Type:
Location: 48754 - 49299 (-)
Type:
Location: 48754 - 49299 (-)
Gene ID: HRGMv2_3176_15_43
Type: TC
Location: 49712 - 51262 (+)
Type: TC
Location: 49712 - 51262 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.