Cluster: HRGMv2_3176_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_01945
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3176_19 | HRGMv2_3176_19_17 | 15500 | 18124 | - | 3.A.3.2.21 |
| pfam | HRGMv2_3176_19 | HRGMv2_3176_19_18 | 18253 | 18840 | - | Dockerin_1 | Dockerin_1 |
| pfam | HRGMv2_3176_19 | HRGMv2_3176_19_19 | 18857 | 19696 | - | Dockerin_1 |
| CAZyme | HRGMv2_3176_19 | HRGMv2_3176_19_20 | 19911 | 21713 | - | GH5_4 |
| TC | HRGMv2_3176_19 | HRGMv2_3176_19_21 | 22117 | 22479 | - | 9.A.11.1.1 |
| TC | HRGMv2_3176_19 | HRGMv2_3176_19_22 | 22476 | 23495 | - | 9.A.11.1.1 |
Gene ID: HRGMv2_3176_19_17
Type: TC
Location: 15500 - 18124 (-)
Type: TC
Location: 15500 - 18124 (-)
Gene ID: HRGMv2_3176_19_18
Type: pfam
Location: 18253 - 18840 (-)
Type: pfam
Location: 18253 - 18840 (-)
Gene ID: HRGMv2_3176_19_19
Type: pfam
Location: 18857 - 19696 (-)
Type: pfam
Location: 18857 - 19696 (-)
Gene ID: HRGMv2_3176_19_20
Type: CAZyme
Location: 19911 - 21713 (-)
Type: CAZyme
Location: 19911 - 21713 (-)
Gene ID: HRGMv2_3176_19_21
Type: TC
Location: 22117 - 22479 (-)
Type: TC
Location: 22117 - 22479 (-)
Gene ID: HRGMv2_3176_19_22
Type: TC
Location: 22476 - 23495 (-)
Type: TC
Location: 22476 - 23495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.