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Cluster: HRGMv2_3176_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3176_8 HRGMv2_3176_8_85 78010 79386 + 9.B.18.1.3
pfam HRGMv2_3176_8 HRGMv2_3176_8_86 79383 80447 + NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix
pfam HRGMv2_3176_8 HRGMv2_3176_8_87 80462 81499 + Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme HRGMv2_3176_8 HRGMv2_3176_8_88 81733 82878 + GT4
CAZyme HRGMv2_3176_8 HRGMv2_3176_8_89 82878 84008 + GT4
pfam HRGMv2_3176_8 HRGMv2_3176_8_90 84029 84964 + 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
NULL(UNKNOWN) HRGMv2_3176_8 HRGMv2_3176_8_91 84990 85334 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3176_8 HRGMv2_3176_8_92 85498 86187 + 3.A.2.1.5
Gene ID: HRGMv2_3176_8_85
Type: TC
Location: 78010 - 79386 (+)
Gene ID: HRGMv2_3176_8_86
Type: pfam
Location: 79383 - 80447 (+)
Gene ID: HRGMv2_3176_8_87
Type: pfam
Location: 80462 - 81499 (+)
Gene ID: HRGMv2_3176_8_88
Type: CAZyme
Location: 81733 - 82878 (+)
Gene ID: HRGMv2_3176_8_89
Type: CAZyme
Location: 82878 - 84008 (+)
Gene ID: HRGMv2_3176_8_90
Type: pfam
Location: 84029 - 84964 (+)
Gene ID: HRGMv2_3176_8_91
Type:
Location: 84990 - 85334 (+)
Gene ID: HRGMv2_3176_8_92
Type: TC
Location: 85498 - 86187 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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