Cluster: HRGMv2_3176_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_10320
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3176_1 | HRGMv2_3176_1_125 | 146991 | 148118 | - | 9.B.34.1.1 |
| pfam | HRGMv2_3176_1 | HRGMv2_3176_1_126 | 148231 | 149766 | - | Big_2 | Big_2 | Big_2 |
| CAZyme | HRGMv2_3176_1 | HRGMv2_3176_1_127 | 149929 | 153429 | - | CBM13 | PL11 |
Gene ID: HRGMv2_3176_1_125
Type: TC
Location: 146991 - 148118 (-)
Type: TC
Location: 146991 - 148118 (-)
Gene ID: HRGMv2_3176_1_126
Type: pfam
Location: 148231 - 149766 (-)
Type: pfam
Location: 148231 - 149766 (-)
Gene ID: HRGMv2_3176_1_127
Type: CAZyme
Location: 149929 - 153429 (-)
Type: CAZyme
Location: 149929 - 153429 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.