Cluster: HRGMv2_3176_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_00917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_4 | HRGMv2_3176_4_59 | 63767 | 65389 | + | GH25 | GH25 |
| pfam | HRGMv2_3176_4 | HRGMv2_3176_4_60 | 65507 | 68845 | + | PDDEXK_1 | ADDB_N |
| pfam | HRGMv2_3176_4 | HRGMv2_3176_4_61 | 68848 | 72528 | + | UvrD-helicase | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| TC | HRGMv2_3176_4 | HRGMv2_3176_4_62 | 72630 | 74063 | - | 9.B.160.1.10 |
Gene ID: HRGMv2_3176_4_59
Type: CAZyme
Location: 63767 - 65389 (+)
Type: CAZyme
Location: 63767 - 65389 (+)
Gene ID: HRGMv2_3176_4_60
Type: pfam
Location: 65507 - 68845 (+)
Type: pfam
Location: 65507 - 68845 (+)
Gene ID: HRGMv2_3176_4_61
Type: pfam
Location: 68848 - 72528 (+)
Type: pfam
Location: 68848 - 72528 (+)
Gene ID: HRGMv2_3176_4_62
Type: TC
Location: 72630 - 74063 (-)
Type: TC
Location: 72630 - 74063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.