Cluster: HRGMv2_3176_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_00195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_1 | HRGMv2_3176_1_21 | 15237 | 16061 | - | GT111 |
| TC | HRGMv2_3176_1 | HRGMv2_3176_1_22 | 16517 | 17179 | - | 9.B.18.1.2 |
| pfam | HRGMv2_3176_1 | HRGMv2_3176_1_23 | 17198 | 17914 | - | CpsB_CapC |
| TC | HRGMv2_3176_1 | HRGMv2_3176_1_24 | 17856 | 19340 | - | 8.A.3.2.1 |
Gene ID: HRGMv2_3176_1_21
Type: CAZyme
Location: 15237 - 16061 (-)
Type: CAZyme
Location: 15237 - 16061 (-)
Gene ID: HRGMv2_3176_1_22
Type: TC
Location: 16517 - 17179 (-)
Type: TC
Location: 16517 - 17179 (-)
Gene ID: HRGMv2_3176_1_23
Type: pfam
Location: 17198 - 17914 (-)
Type: pfam
Location: 17198 - 17914 (-)
Gene ID: HRGMv2_3176_1_24
Type: TC
Location: 17856 - 19340 (-)
Type: TC
Location: 17856 - 19340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.