Cluster: HRGMv2_3176_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_02444
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3176_9 | HRGMv2_3176_9_11 | 13403 | 14335 | - | 1.A.23.2.2 |
| STP | HRGMv2_3176_9 | HRGMv2_3176_9_12 | 14404 | 14937 | - | TetR_N |
| CAZyme | HRGMv2_3176_9 | HRGMv2_3176_9_13 | 15115 | 16914 | + | CBM48 | GH13_9 |
| NULL(UNKNOWN) | HRGMv2_3176_9 | HRGMv2_3176_9_14 | 17016 | 17357 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3176_9 | HRGMv2_3176_9_15 | 17545 | 20127 | + | GT51 |
Gene ID: HRGMv2_3176_9_11
Type: TC
Location: 13403 - 14335 (-)
Type: TC
Location: 13403 - 14335 (-)
Gene ID: HRGMv2_3176_9_12
Type: STP
Location: 14404 - 14937 (-)
Type: STP
Location: 14404 - 14937 (-)
Gene ID: HRGMv2_3176_9_13
Type: CAZyme
Location: 15115 - 16914 (+)
Type: CAZyme
Location: 15115 - 16914 (+)
Gene ID: HRGMv2_3176_9_14
Type:
Location: 17016 - 17357 (-)
Type:
Location: 17016 - 17357 (-)
Gene ID: HRGMv2_3176_9_15
Type: CAZyme
Location: 17545 - 20127 (+)
Type: CAZyme
Location: 17545 - 20127 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.