Cluster: HRGMv2_3176_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_10319
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3176_9 | HRGMv2_3176_9_104 | 110923 | 112605 | - | 2.A.53.3.11 |
| TF | HRGMv2_3176_9 | HRGMv2_3176_9_105 | 112744 | 113607 | - | HTH_AraC |
| CAZyme | HRGMv2_3176_9 | HRGMv2_3176_9_106 | 113746 | 115182 | + | GH8 |
| CAZyme | HRGMv2_3176_9 | HRGMv2_3176_9_107 | 115435 | 117159 | + | CE2 |
Gene ID: HRGMv2_3176_9_104
Type: TC
Location: 110923 - 112605 (-)
Type: TC
Location: 110923 - 112605 (-)
Gene ID: HRGMv2_3176_9_105
Type: TF
Location: 112744 - 113607 (-)
Type: TF
Location: 112744 - 113607 (-)
Gene ID: HRGMv2_3176_9_106
Type: CAZyme
Location: 113746 - 115182 (+)
Type: CAZyme
Location: 113746 - 115182 (+)
Gene ID: HRGMv2_3176_9_107
Type: CAZyme
Location: 115435 - 117159 (+)
Type: CAZyme
Location: 115435 - 117159 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.