Cluster: HRGMv2_3176_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- CGC Family ID: CGCFAM_07283
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_11 | HRGMv2_3176_11_78 | 76009 | 78780 | - | GH3 |
| pfam | HRGMv2_3176_11 | HRGMv2_3176_11_79 | 78922 | 79206 | - | DUF2325 |
| TC | HRGMv2_3176_11 | HRGMv2_3176_11_80 | 79691 | 81082 | + | 2.A.66.1.12 |
Gene ID: HRGMv2_3176_11_78
Type: CAZyme
Location: 76009 - 78780 (-)
Type: CAZyme
Location: 76009 - 78780 (-)
Gene ID: HRGMv2_3176_11_79
Type: pfam
Location: 78922 - 79206 (-)
Type: pfam
Location: 78922 - 79206 (-)
Gene ID: HRGMv2_3176_11_80
Type: TC
Location: 79691 - 81082 (+)
Type: TC
Location: 79691 - 81082 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.