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Genome Details

Selected Rep_genome_ID: HRGMv2_2748
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger
→
Species
Gemmiger sp900540595
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR032568 2,429,658 96.71% 0% China Asia CGMR
CGMR068126 2,730,227 98.64% 0% China Asia CGMR
HRGMv2_2748 3,072,273 98.23% 0% South Korea Asia HRGM
MGYG000003921 2,675,268 98.64% 0% China Asia UHGG
Rep_3053 3,461,815 97.9592% 1.81406% NA NA WIS
Rep_3054 5,045,594 96.5986% 0.912183% NA NA WIS
SPMP61_bin.62 2,567,241 95.24% 0% Singapore Asia SPMP
SPMP97_bin.109 2,724,103 90.16% 0.11% Singapore Asia SPMP
SW054_bin.35 2,791,373 97.96% 1.02% NA Africa H3AfricaPhase2
VatanenT_2016_SRR4305450_bin.7 2,414,904 92.17% 0.136% Estonia Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2748_CGC14 CGCFAM_00008 Yes 6 2
HRGMv2_2748_CGC20 CGCFAM_00193 Yes 11 5
HRGMv2_2748_CGC34 CGCFAM_00259 Yes 8 4
HRGMv2_2748_CGC27 CGCFAM_00466 Yes 5 2
HRGMv2_2748_CGC13 CGCFAM_00679 Yes 6 1
HRGMv2_2748_CGC16 CGCFAM_00763 Yes 5 1
HRGMv2_2748_CGC19 CGCFAM_00970 Yes 5 4
HRGMv2_2748_CGC32 CGCFAM_00990 Yes 9 4
HRGMv2_2748_CGC8 CGCFAM_01316 Yes 9 3
HRGMv2_2748_CGC6 CGCFAM_01317 Yes 6 2
HRGMv2_2748_CGC9 CGCFAM_01318 Yes 8 1
HRGMv2_2748_CGC31 CGCFAM_02378 Yes 14 7
HRGMv2_2748_CGC11 CGCFAM_03125 Yes 14 2
HRGMv2_2748_CGC33 CGCFAM_03554 Yes 12 5
HRGMv2_2748_CGC25 CGCFAM_04416 Yes 9 6
HRGMv2_2748_CGC24 CGCFAM_04434 Yes 5 1
HRGMv2_2748_CGC35 CGCFAM_04690 Yes 6 2
HRGMv2_2748_CGC40 CGCFAM_06919 Yes 11 4
HRGMv2_2748_CGC29 CGCFAM_07755 Yes 16 5
Top CAZyme Families