Cluster: HRGMv2_2748_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2748
- CGC Family ID: CGCFAM_00970
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1552 | 1626876 | 1627961 | - | GH43_24 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1553 | 1627951 | 1630533 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1554 | 1630545 | 1632824 | - | GH2 |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1555 | 1632851 | 1634587 | - | GH43_28 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_1556 | 1634649 | 1636313 | - | 2.A.2.3.5 |
Gene ID: HRGMv2_2748_1_1552
Type: CAZyme
Location: 1626876 - 1627961 (-)
Type: CAZyme
Location: 1626876 - 1627961 (-)
Gene ID: HRGMv2_2748_1_1553
Type: CAZyme
Location: 1627951 - 1630533 (-)
Type: CAZyme
Location: 1627951 - 1630533 (-)
Gene ID: HRGMv2_2748_1_1554
Type: CAZyme
Location: 1630545 - 1632824 (-)
Type: CAZyme
Location: 1630545 - 1632824 (-)
Gene ID: HRGMv2_2748_1_1555
Type: CAZyme
Location: 1632851 - 1634587 (-)
Type: CAZyme
Location: 1632851 - 1634587 (-)
Gene ID: HRGMv2_2748_1_1556
Type: TC
Location: 1634649 - 1636313 (-)
Type: TC
Location: 1634649 - 1636313 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.