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Cluster: HRGMv2_2748_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2748_1 HRGMv2_2748_1_674 691332 692348 - GT2
pfam HRGMv2_2748_1 HRGMv2_2748_1_675 692370 694088 - Hydrolase | Hydrolase_like
CAZyme HRGMv2_2748_1 HRGMv2_2748_1_676 694085 694978 - GT2
CAZyme HRGMv2_2748_1 HRGMv2_2748_1_677 694971 695741 - GT111
TC HRGMv2_2748_1 HRGMv2_2748_1_678 696026 697927 - 3.A.1.121.4
pfam HRGMv2_2748_1 HRGMv2_2748_1_679 698001 698756 - Hydrolase | Hydrolase_like | HAD_2
pfam HRGMv2_2748_1 HRGMv2_2748_1_680 698776 700464 - Lipase_GDSL_2 | Flg_new_2
TC HRGMv2_2748_1 HRGMv2_2748_1_681 700810 701604 - 3.A.1.34.1
TC HRGMv2_2748_1 HRGMv2_2748_1_682 701597 702544 - 3.A.1.34.1
Gene ID: HRGMv2_2748_1_674
Type: CAZyme
Location: 691332 - 692348 (-)
Gene ID: HRGMv2_2748_1_675
Type: pfam
Location: 692370 - 694088 (-)
Gene ID: HRGMv2_2748_1_676
Type: CAZyme
Location: 694085 - 694978 (-)
Gene ID: HRGMv2_2748_1_677
Type: CAZyme
Location: 694971 - 695741 (-)
Gene ID: HRGMv2_2748_1_678
Type: TC
Location: 696026 - 697927 (-)
Gene ID: HRGMv2_2748_1_679
Type: pfam
Location: 698001 - 698756 (-)
Gene ID: HRGMv2_2748_1_680
Type: pfam
Location: 698776 - 700464 (-)
Gene ID: HRGMv2_2748_1_681
Type: TC
Location: 700810 - 701604 (-)
Gene ID: HRGMv2_2748_1_682
Type: TC
Location: 701597 - 702544 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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