Cluster: HRGMv2_2748_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2748
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1242 | 1279128 | 1280966 | - | GT2 | GT2 |
| NULL(UNKNOWN) | HRGMv2_2748_1 | HRGMv2_2748_1_1243 | 1280956 | 1281477 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2748_1 | HRGMv2_2748_1_1244 | 1281479 | 1281727 | - | FakA-like_M |
| CAZyme | HRGMv2_2748_1 | HRGMv2_2748_1_1245 | 1281741 | 1283615 | - | GT2 | GT2 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_1246 | 1283619 | 1284395 | - | 3.A.1.103.1 |
| TC | HRGMv2_2748_1 | HRGMv2_2748_1_1247 | 1284408 | 1285205 | - | 3.A.1.103.6 |
Gene ID: HRGMv2_2748_1_1242
Type: CAZyme
Location: 1279128 - 1280966 (-)
Type: CAZyme
Location: 1279128 - 1280966 (-)
Gene ID: HRGMv2_2748_1_1243
Type:
Location: 1280956 - 1281477 (-)
Type:
Location: 1280956 - 1281477 (-)
Gene ID: HRGMv2_2748_1_1244
Type: pfam
Location: 1281479 - 1281727 (-)
Type: pfam
Location: 1281479 - 1281727 (-)
Gene ID: HRGMv2_2748_1_1245
Type: CAZyme
Location: 1281741 - 1283615 (-)
Type: CAZyme
Location: 1281741 - 1283615 (-)
Gene ID: HRGMv2_2748_1_1246
Type: TC
Location: 1283619 - 1284395 (-)
Type: TC
Location: 1283619 - 1284395 (-)
Gene ID: HRGMv2_2748_1_1247
Type: TC
Location: 1284408 - 1285205 (-)
Type: TC
Location: 1284408 - 1285205 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.