Cluster: HRGMv2_2748_CGC25

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1971	2104895	2106070	+	GT4
pfam	HRGMv2_2748_1	HRGMv2_2748_1_1972	2106067	2107077	+	GINT1_N
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1973	2107135	2108247	+	GT4
NULL(UNKNOWN)	HRGMv2_2748_1	HRGMv2_2748_1_1974	2108240	2109148	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1975	2109161	2110267	+	GT4
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1976	2110264	2111199	+	GT11
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1977	2111214	2112203	+	GT2
TC	HRGMv2_2748_1	HRGMv2_2748_1_1978	2112421	2113941	+	2.A.66.1.40
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1979	2113965	2114810	+	GT6

Gene ID: HRGMv2_2748_1_1971
Type: CAZyme
Location: 2104895 - 2106070 (+)

Gene ID: HRGMv2_2748_1_1972
Type: pfam
Location: 2106067 - 2107077 (+)

Gene ID: HRGMv2_2748_1_1973
Type: CAZyme
Location: 2107135 - 2108247 (+)

Gene ID: HRGMv2_2748_1_1974
Type:
Location: 2108240 - 2109148 (+)

Gene ID: HRGMv2_2748_1_1975
Type: CAZyme
Location: 2109161 - 2110267 (+)

Gene ID: HRGMv2_2748_1_1976
Type: CAZyme
Location: 2110264 - 2111199 (+)

Gene ID: HRGMv2_2748_1_1977
Type: CAZyme
Location: 2111214 - 2112203 (+)

Gene ID: HRGMv2_2748_1_1978
Type: TC
Location: 2112421 - 2113941 (+)

Gene ID: HRGMv2_2748_1_1979
Type: CAZyme
Location: 2113965 - 2114810 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.