Genome Details
Selected Rep_genome_ID: HRGMv2_2676
Total Genomes Found: 23
Total Genomes Found: 23
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C19.bin_3 | 2,994,131 | 100% | 0% | China(Inner Mongolia) | Asia | IMGG |
| GCA_021619025.1_ASM2161902v1_genomic | 2,469,379 | 94.49% | 3.06% | NA | Africa | H3AfricaPhase1 |
| GCA_021620245.1_ASM2162024v1_genomic | 2,970,638 | 97.51% | 2.04% | NA | Africa | H3AfricaPhase1 |
| GCA_021621235.1_ASM2162123v1_genomic | 2,818,405 | 94.22% | 3.2% | NA | Africa | H3AfricaPhase1 |
| GCA_021626805.1_ASM2162680v1_genomic | 2,798,620 | 97.28% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021630865.1_ASM2163086v1_genomic | 2,364,725 | 95.46% | 1.72% | NA | Africa | H3AfricaPhase1 |
| GCA_021636725.1_ASM2163672v1_genomic | 2,599,058 | 95.99% | 2.57% | NA | Africa | H3AfricaPhase1 |
| GCA_021637085.1_ASM2163708v1_genomic | 2,805,462 | 94.58% | 0.79% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2676 | 3,070,845 | 100% | 0% | South Korea | Asia | HRGM |
| Rep_3078 | 2,766,610 | 95.9184% | 0% | NA | NA | WIS |
| SPMP06_bin.45 | 2,535,575 | 96.6% | 2.04% | Singapore | Asia | SPMP |
| SPMP104_bin.42 | 2,581,060 | 97.73% | 0% | Singapore | Asia | SPMP |
| SPMP13_bin.108 | 2,231,932 | 93.95% | 2.38% | Singapore | Asia | SPMP |
| SPMP16_bin.47 | 2,904,029 | 99.09% | 0.68% | Singapore | Asia | SPMP |
| SPMP25_bin.51 | 1,989,919 | 95.56% | 0% | Singapore | Asia | SPMP |
| SPMP28_bin.75 | 2,709,775 | 97.11% | 1.7% | Singapore | Asia | SPMP |
| SPMP29_bin.42 | 2,706,028 | 97.96% | 1.36% | Singapore | Asia | SPMP |
| SPMP36_bin.49 | 2,468,933 | 96.6% | 0.68% | Singapore | Asia | SPMP |
| SPMP39_bin.60 | 2,031,294 | 91.55% | 1.7% | Singapore | Asia | SPMP |
| SPMP46_bin.78 | 2,312,927 | 99.32% | 0% | Singapore | Asia | SPMP |
| SPMP54_bin.11 | 2,275,888 | 97.96% | 0% | Singapore | Asia | SPMP |
| SPMP81_bin.1 | 2,860,161 | 97.96% | 0% | Singapore | Asia | SPMP |
| SW023_bin.39 | 2,440,791 | 97.96% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2676_CGC4 | CGCFAM_00002 | Yes | 5 | 2 | |
| HRGMv2_2676_CGC29 | CGCFAM_00005 | Yes | 5 | 2 | |
| HRGMv2_2676_CGC30 | CGCFAM_00006 | Yes | 3 | 1 | |
| HRGMv2_2676_CGC3 | CGCFAM_00092 | Yes | 6 | 2 | |
| HRGMv2_2676_CGC21 | CGCFAM_00209 | Yes | 8 | 1 | |
| PUL0658_HRGMv2_2676_C2 | CGCFAM_00226 | Yes | 13 | 5 | beta-mannan |
| HRGMv2_2676_CGC26 | CGCFAM_00252 | Yes | 7 | 1 | |
| HRGMv2_2676_CGC15 | CGCFAM_00537 | Yes | 5 | 1 | |
| HRGMv2_2676_CGC11 | CGCFAM_00594 | Yes | 8 | 2 | |
| HRGMv2_2676_CGC16 | CGCFAM_00605 | Yes | 6 | 2 | |
| HRGMv2_2676_CGC24 | CGCFAM_00688 | Yes | 10 | 1 | |
| HRGMv2_2676_CGC17 | CGCFAM_01090 | Yes | 5 | 1 | |
| HRGMv2_2676_CGC32 | CGCFAM_01109 | Yes | 5 | 2 | |
| HRGMv2_2676_CGC14 | CGCFAM_01236 | Yes | 11 | 2 | |
| HRGMv2_2676_CGC20 | CGCFAM_02429 | Yes | 5 | 1 | |
| HRGMv2_2676_CGC19 | CGCFAM_02493 | Yes | 6 | 2 | |
| HRGMv2_2676_CGC8 | CGCFAM_02683 | Yes | 9 | 2 | |
| HRGMv2_2676_CGC9 | CGCFAM_02902 | Yes | 7 | 1 | |
| HRGMv2_2676_CGC2 | CGCFAM_10146 | Yes | 26 | 10 |
Top CAZyme Families