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Cluster: HRGMv2_2676_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2676_1 HRGMv2_2676_1_1089 1140159 1141499 - 2.A.56.1.5
pfam HRGMv2_2676_1 HRGMv2_2676_1_1090 1141501 1142022 - DctQ
TC HRGMv2_2676_1 HRGMv2_2676_1_1091 1142120 1143214 - 2.A.56.1.1
CAZyme HRGMv2_2676_1 HRGMv2_2676_1_1092 1143530 1146232 - GH28
TC HRGMv2_2676_1 HRGMv2_2676_1_1093 1146524 1147528 - 2.A.56.1.2
TF HRGMv2_2676_1 HRGMv2_2676_1_1094 1147525 1148340 - HTH_AraC | HTH_AraC
TC HRGMv2_2676_1 HRGMv2_2676_1_1095 1148337 1149866 - 8.A.59.2.1
Gene ID: HRGMv2_2676_1_1089
Type: TC
Location: 1140159 - 1141499 (-)
Gene ID: HRGMv2_2676_1_1090
Type: pfam
Location: 1141501 - 1142022 (-)
Gene ID: HRGMv2_2676_1_1091
Type: TC
Location: 1142120 - 1143214 (-)
Gene ID: HRGMv2_2676_1_1092
Type: CAZyme
Location: 1143530 - 1146232 (-)
Gene ID: HRGMv2_2676_1_1093
Type: TC
Location: 1146524 - 1147528 (-)
Gene ID: HRGMv2_2676_1_1094
Type: TF
Location: 1147525 - 1148340 (-)
Gene ID: HRGMv2_2676_1_1095
Type: TC
Location: 1148337 - 1149866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2676_1_1092 vegetarian > vegan 4.37256 0.01319

🧭 Explore Read Mapping of CGC

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