dbCAN HGM

Cluster: HRGMv2_2676_CGC8

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2676_1	HRGMv2_2676_1_1075	1115798	1118203	+	GT35
CAZyme	HRGMv2_2676_1	HRGMv2_2676_1_1076	1118278	1120134	+	GH13_39
pfam	HRGMv2_2676_1	HRGMv2_2676_1_1077	1120396	1120857	+	NfeD
TC	HRGMv2_2676_1	HRGMv2_2676_1_1078	1120873	1121778	+	8.A.21.2.2
NULL(UNKNOWN)	HRGMv2_2676_1	HRGMv2_2676_1_1079	1121884	1122282	-	NULL(UNKNOWN) [View Structural Homologs]
pfam	HRGMv2_2676_1	HRGMv2_2676_1_1080	1122321	1123607	-	Orn_DAP_Arg_deC \| Orn_Arg_deC_N
TC	HRGMv2_2676_1	HRGMv2_2676_1_1081	1123692	1125590	-	9.B.18.2.1
pfam	HRGMv2_2676_1	HRGMv2_2676_1_1082	1125741	1127306	-	Polysacc_synt
TC	HRGMv2_2676_1	HRGMv2_2676_1_1083	1127389	1128348	+	3.A.1.132.3

Gene ID: HRGMv2_2676_1_1075
Type: CAZyme
Location: 1115798 - 1118203 (+)

Gene ID: HRGMv2_2676_1_1076
Type: CAZyme
Location: 1118278 - 1120134 (+)

Gene ID: HRGMv2_2676_1_1077
Type: pfam
Location: 1120396 - 1120857 (+)

Gene ID: HRGMv2_2676_1_1078
Type: TC
Location: 1120873 - 1121778 (+)

Gene ID: HRGMv2_2676_1_1079
Type:
Location: 1121884 - 1122282 (-)

Gene ID: HRGMv2_2676_1_1080
Type: pfam
Location: 1122321 - 1123607 (-)

Gene ID: HRGMv2_2676_1_1081
Type: TC
Location: 1123692 - 1125590 (-)

Gene ID: HRGMv2_2676_1_1082
Type: pfam
Location: 1125741 - 1127306 (-)

Gene ID: HRGMv2_2676_1_1083
Type: TC
Location: 1127389 - 1128348 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.