Cluster: HRGMv2_2676_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2676
- CGC Family ID: CGCFAM_02493
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1977 | 2096290 | 2096802 | + | 4.A.1.1.13 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1978 | 2096923 | 2098050 | - | CE9 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1979 | 2098256 | 2098960 | - | 4.A.1.1.2 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1980 | 2098930 | 2099718 | - | 4.A.1.1.7 |
| STP | HRGMv2_2676_1 | HRGMv2_2676_1_1981 | 2100004 | 2100513 | - | NUDIX |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1982 | 2100706 | 2101296 | - | CBM13 |
Gene ID: HRGMv2_2676_1_1977
Type: TC
Location: 2096290 - 2096802 (+)
Type: TC
Location: 2096290 - 2096802 (+)
Gene ID: HRGMv2_2676_1_1978
Type: CAZyme
Location: 2096923 - 2098050 (-)
Type: CAZyme
Location: 2096923 - 2098050 (-)
Gene ID: HRGMv2_2676_1_1979
Type: TC
Location: 2098256 - 2098960 (-)
Type: TC
Location: 2098256 - 2098960 (-)
Gene ID: HRGMv2_2676_1_1980
Type: TC
Location: 2098930 - 2099718 (-)
Type: TC
Location: 2098930 - 2099718 (-)
Gene ID: HRGMv2_2676_1_1981
Type: STP
Location: 2100004 - 2100513 (-)
Type: STP
Location: 2100004 - 2100513 (-)
Gene ID: HRGMv2_2676_1_1982
Type: CAZyme
Location: 2100706 - 2101296 (-)
Type: CAZyme
Location: 2100706 - 2101296 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.