Cluster: HRGMv2_2676_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2676
- CGC Family ID: CGCFAM_00092
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_372 | 408648 | 409532 | + | 3.A.1.1.18 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_373 | 409545 | 410441 | + | 3.A.1.1.25 |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_374 | 410453 | 410641 | + | DUF6903 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_375 | 410681 | 412840 | + | GH112 |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_376 | 413329 | 416412 | - | GH2 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_377 | 416527 | 417897 | - | 2.A.2.3.4 |
Gene ID: HRGMv2_2676_1_372
Type: TC
Location: 408648 - 409532 (+)
Type: TC
Location: 408648 - 409532 (+)
Gene ID: HRGMv2_2676_1_373
Type: TC
Location: 409545 - 410441 (+)
Type: TC
Location: 409545 - 410441 (+)
Gene ID: HRGMv2_2676_1_374
Type: pfam
Location: 410453 - 410641 (+)
Type: pfam
Location: 410453 - 410641 (+)
Gene ID: HRGMv2_2676_1_375
Type: CAZyme
Location: 410681 - 412840 (+)
Type: CAZyme
Location: 410681 - 412840 (+)
Gene ID: HRGMv2_2676_1_376
Type: CAZyme
Location: 413329 - 416412 (-)
Type: CAZyme
Location: 413329 - 416412 (-)
Gene ID: HRGMv2_2676_1_377
Type: TC
Location: 416527 - 417897 (-)
Type: TC
Location: 416527 - 417897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.