Cluster: HRGMv2_2676_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2676
- CGC Family ID: CGCFAM_00605
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1749 | 1852254 | 1854023 | - | GH2 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1750 | 1854270 | 1856189 | - | 3.A.1.135.5 |
| TC | HRGMv2_2676_1 | HRGMv2_2676_1_1751 | 1856189 | 1857940 | - | 3.A.1.135.5 |
| TF | HRGMv2_2676_1 | HRGMv2_2676_1_1752 | 1858081 | 1858563 | - | MarR |
| pfam | HRGMv2_2676_1 | HRGMv2_2676_1_1753 | 1858722 | 1859591 | - | SAICAR_synt |
| CAZyme | HRGMv2_2676_1 | HRGMv2_2676_1_1754 | 1859916 | 1861355 | + | GH1 |
Gene ID: HRGMv2_2676_1_1749
Type: CAZyme
Location: 1852254 - 1854023 (-)
Type: CAZyme
Location: 1852254 - 1854023 (-)
Gene ID: HRGMv2_2676_1_1750
Type: TC
Location: 1854270 - 1856189 (-)
Type: TC
Location: 1854270 - 1856189 (-)
Gene ID: HRGMv2_2676_1_1751
Type: TC
Location: 1856189 - 1857940 (-)
Type: TC
Location: 1856189 - 1857940 (-)
Gene ID: HRGMv2_2676_1_1752
Type: TF
Location: 1858081 - 1858563 (-)
Type: TF
Location: 1858081 - 1858563 (-)
Gene ID: HRGMv2_2676_1_1753
Type: pfam
Location: 1858722 - 1859591 (-)
Type: pfam
Location: 1858722 - 1859591 (-)
Gene ID: HRGMv2_2676_1_1754
Type: CAZyme
Location: 1859916 - 1861355 (+)
Type: CAZyme
Location: 1859916 - 1861355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.